Siniperca chuatsi (mandarin fish): 122874445
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Entry
122874445 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04137
Mitophagy - animal
schu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122874445
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122874445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122874445
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
122874445
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122874445
Multi subunit type E3
ERAD complex
122874445
LMBR1L-GP78-UBAC2 complex
122874445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
G2BR
CUE
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-C3HC4_4
zf_RING_Vps8
Prok-RING_4
PGA2
zf-RING_Vps41
GOLD_2
Motif
Other DBs
NCBI-GeneID:
122874445
NCBI-ProteinID:
XP_044048254
LinkDB
All DBs
Position
LG4:31422608..31438770
Genome browser
AA seq
631 aa
AA seq
DB search
MPFLFLERFPWPSLQTYTALSAALLAGTVLTFCSSESRSQSSPEETHRHPVQSSRLSRYI
RDGGLYLSAGYADVAADVLLYLLTDSVFVWVMVNTACCVLLLIGKLIQCVVFGSLRVSEK
QHLKDKFWNFIFYKLIFVFGVLNVQTVEEVVMWWLWFSVLVFLHLLVQLCKDRFEYLSFS
PTTPLSSHARVLLLLVLLLLCCGGLATLCSRLVRSQGRHTAAFMAAECMLVTVMTTHVMF
RYSIHLWDVNQEGSWDNKSSYVYYTDLLMELLLLGLDLLHHIHMLVFSNIWLSMASLVIF
MQLRFLVQEVQKRIRRHHNYLRVLRNMETRFTVASADELAANNDDCAICWDVMSSARKLP
CGHLFHSSCLRSWLEQDTSCPTCRMSLNIGERHVERETREATADNVAAGPGVDTQPHLNQ
LNHFFHFDGSRIASWLPSFSVEVMATANFLGVAPTNPSQINTMAQQIQEMFPQVALQLIM
QDLEMTQSLEVTTNNILEGRIQTAASPLVFEQPVIQITPPPEDEGGASSESEQEEEDETE
DEEEDEEAAEKVEVQFSTSAEQRQKLLLQRKEELLQRARRDYLLTRSTRSHTGSHESSDS
DALTFDPVTLRRETLAAAAERRLQRPSDSAH
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttgttcctggagcggtttccctggcccagtttacagacatacacggcgctg
agtgctgccctgctggccgggaccgtcctgaccttctgctcctccgagtcccgctcacag
tccagcccggaggagacccacagacacccggtccaaagctccaggctcagccgctacatc
cgggatggtggactgtatctgagcgcagggtatgcagatgtggctgcagatgttctgctg
tacctgctgactgacagtgtctttgtttgggtgatggtaaacacagcctgctgtgtcttg
ctgctcatcggcaaactcatccagtgtgtcgtgttcgggtctctccgcgtcagtgaaaaa
cagcacctgaaggacaagttctggaacttcatcttctacaagctgatctttgtgttcggc
gtcctgaacgtccagacggtggaggaggtggtgatgtggtggctctggttctccgtcctg
gtcttcctccatctcctggttcagctctgcaaggaccgctttgaatatctgtccttctct
ccgaccactcctctgtccagccacgctcgggtgctgctgctgttggtgctgctgctgttg
tgctgcggtggtctggcgaccctctgcagccggctggttcgcagtcaaggccgccacacc
gccgcattcatggctgctgagtgtatgttggtgacggtcatgaccacacacgtcatgttt
cggtactccatccacctgtgggacgtgaaccaggagggcagctgggacaataaatcctcc
tatgtttactacaccgacctgctgatggagctgctgttactgggcctggacctgctgcat
cacatccacatgctggtcttcagtaacatctggttgtccatggcgagtctggtgatcttc
atgcagcttcgtttcctggttcaggaggttcagaagagaattcgccgccaccacaactac
ctgcgagtcctccgcaacatggagacccggtttactgtggcgtctgcagatgaactggca
gccaataacgatgactgtgcgatctgctgggatgtgatgagttcggctcggaaactgccc
tgcggtcacctcttccacagctcgtgtctgcgctcctggctcgaacaggacacatcatgt
ccgacatgtcggatgtccctgaacatcggtgaaagacatgtggagagggagaccagggag
gccaccgctgacaacgtggctgctggccccggtgtcgacactcagccgcacctcaaccag
ctcaaccacttcttccactttgatggttctcgtattgccagctggttgcccagtttctca
gtggaagttatggccacggccaactttttaggcgttgcaccaaccaacccgtctcagatc
aacaccatggctcagcagatccaggagatgtttcctcaggttgccctccagctgattatg
caggacctggagatgactcaatccctcgaggtcaccaccaacaacatcctggagggacga
atccagacagccgcgtcgccactggtctttgagcagccggtcatacagataactcctcca
cctgaggacgagggcggagccagcagcgagtcagagcaggaagaggaggacgagacggag
gacgaggaggaagatgaagaggcagcggagaaggtggaggttcagttttctacgtcagcg
gagcagcgacagaaactgctgctgcagaggaaggaggagctgctgcagcgagcgcgcagg
gactatcttctgacccggagcaccaggtcccacacgggaagccacgagtcctccgacagc
gacgctttgaccttcgaccccgtgaccctgcggcgggaaacattagcggcggcggcagag
cgacgcctgcagagaccgtctgactccgcccactga
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