KEGG   Siniperca chuatsi (mandarin fish): 122874647
Entry
122874647         CDS       T08948                                 
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
  KO
K16482  centriolar protein POC1
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122874647 (poc1b)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:schu03037]
    122874647 (poc1b)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    122874647 (poc1b)
Cilium and associated proteins [BR:schu03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   122874647 (poc1b)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_DCAF12 Beta-prop_IP5PC_F eIF2A Beta-prop_NWD2_C PEP5_VPS11_N Tricorn_2nd Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Cytochrom_D1 PROPPIN
Other DBs
NCBI-GeneID: 122874647
NCBI-ProteinID: XP_044048744
LinkDB
Position
LG4:complement(28475908..28522023)
AA seq 327 aa
MPTMASVLEDPTLERHFKGHKDAVTCADFNPNRKQLASGSMDKSLMIWNLAPKARAFRFV
GHQDVITGVQFSPLGNLVATSSKDRTVRLWTPSMKGESTVFKAHTAAVRSVGFSHDGQRL
VTASDDKSVKVWNVHRQCFVYSLNQHTNWVRCARFSPDGRLIASCGDDRAVRLWDTSTKH
CINCFTDYDGPATFVDFNSSGTCIASSGADSSLKIWDLRTNKLIQHYQVHSAGINSFSFH
PSNNYLISGSSDSTVKILDLLEGRLIYTLRGHKGAVITVAFSRAGDLFASGGADGQVLMW
RTNFDTKSYQDVLQQHSRRSTPIPHPT
NT seq 984 nt   +upstreamnt  +downstreamnt
atgcccacaatggcgtctgttttggaggatccaacccttgagagacacttcaaggggcat
aaagatgctgtcacctgtgcagacttcaacccaaaccgcaaacaactggcctcggggtca
atggataagagcctgatgatctggaatctggctccaaaggcgagggctttccgctttgtt
ggccaccaagacgtcatcactggggtgcagttctcccccttgggtaacctggtggctact
tcctccaaggacagaacggtccgactgtggacaccttccatgaaaggagagtcaacagtg
ttcaaagcccacacggccgctgtacgcagtgttggtttctcccacgatggccagagactg
gtgacagcgtctgacgacaagtcggtcaaagtgtggaatgttcaccggcagtgcttcgtc
tactctctcaaccagcacaccaactgggtgcgctgtgccaggttttctccagatgggcgg
ctaatagcttcctgtggagacgaccgtgccgtccggctgtgggacacgtccaccaaacac
tgcatcaactgttttactgactatgatggaccagcaacgtttgttgatttcaactcaagc
ggcacctgtattgcatcctcaggagctgacagttcactgaaaatctgggatctacggacc
aacaagctgattcagcattatcaagtccacagtgcaggaatcaacagcttttccttccac
ccgtccaacaactacctgatcagtggctccagcgacagcactgttaaaatactagacctg
ctggaggggcgcctcatctacaccctccgtggacacaagggcgctgtaatcacagtagcc
ttttccagggctggagatctctttgcctcggggggagctgatggtcaggtgctgatgtgg
aggacaaactttgacaccaaatcctaccaggatgtcctgcaacaacacagccggaggtcc
accccgatcccccaccccacctga

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