Siniperca chuatsi (mandarin fish): 122874789
Help
Entry
122874789 CDS
T08948
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04620
Toll-like receptor signaling pathway
schu04621
NOD-like receptor signaling pathway
schu04622
RIG-I-like receptor signaling pathway
schu04623
Cytosolic DNA-sensing pathway
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122874789 (irf7)
04621 NOD-like receptor signaling pathway
122874789 (irf7)
04622 RIG-I-like receptor signaling pathway
122874789 (irf7)
04623 Cytosolic DNA-sensing pathway
122874789 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122874789 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122874789 (irf7)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122874789 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
122874789
NCBI-ProteinID:
XP_044049076
LinkDB
All DBs
Position
LG4:17782856..17789007
Genome browser
AA seq
436 aa
AA seq
DB search
MQCPPKPQFASWLIEQVETGQYKGLCYVDQNKFRVPWKHNSRKDCNEEDSKIFRAWAVAS
GKINEFPTDKARWKTNFRCALNNLYVRFKMIEDNSKNSDDPHKIYEIINTEYNYECQPTQ
DSQEDSKMAPDIYRNIECFPSGNEHNLLNNFMALDLGNHPSEEQPWAENFGQHKSAVFES
YPLAAEDHPQLLPDQTSYYEVNPQPVLSSPLQPSIYDLEISIHYRKRQMLKTTLHTARLQ
LHYLLEAPELSAHHICFPSTDGLLDHKQVDFTNRVLNSIQKGLLLEVRETGIYAWRQDRC
HVFASTSDPSVAHPDPRKLPQNTMVELLSFEKYVNELKQFKENNGGSPEYTINMCFGEKF
PDGKPLEKKLIVVKVVPLICRHFHEMAQMEGASSLHSANVSLQISHNSLYDLIYSVFGLP
TVEEPARADAAFTHQL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgccctcccaagcctcagtttgccagctggctcatagagcaggtggagacaggc
cagtacaagggcctgtgctatgtggaccaaaacaagttcagagtcccatggaagcacaac
tccagaaaggactgcaatgaagaggacagcaaaatattccgggcatgggcagtagcaagt
ggaaaaatcaacgagttccccactgacaaggccaggtggaaaaccaactttcgatgcgct
ctgaacaacctctacgtgcgcttcaagatgatagaggataattccaagaattctgacgac
cctcataaaatctatgagattatcaacactgagtacaactatgaatgtcagccaacacaa
gactcccaggaggattccaaaatggctccagatatctacagaaacatagagtgcttcccc
tcaggaaatgagcacaatctgcttaacaatttcatggccttggatcttggcaaccatcct
tcagaggagcaaccgtgggcagagaactttggccagcacaagtcagctgtctttgaaagc
tatcctttagcagccgaggaccacccacagctgttaccagatcagacgtcttactatgag
gtaaatcctcagccggtcctcagttcacctctgcagccaagtatatatgacctggagatc
tccatccactacaggaaaagacaaatgctaaagaccacactgcacactgcccgtctccag
ctccactacctactcgaggcccctgagctcagtgcccatcatatctgcttcccctccact
gatggtctgctggaccataaacaggttgatttcaccaaccgcgtccttaacagcatccag
aaaggtctactcctggaggtacgggagactggtatctatgcctggaggcaggacaggtgc
catgtgtttgccagcaccagtgaccccagtgtggctcacccagacccaagaaagctgccc
cagaacaccatggtggagctcctcagttttgagaagtatgtgaatgaattgaaacagttt
aaagagaacaatggtggttctccagaatacaccatcaacatgtgctttggagagaaattt
cctgatggaaaacctttggagaagaagcttatcgtagtgaaggtggtccctctgatctgt
cgacactttcatgagatggcccagatggagggggcttcgtctcttcacagcgccaacgtc
agcctacagatctcacacaacagcctctatgatctcatttactctgtctttggtctgccg
acagttgaagagccagcacgggctgatgcggcttttacacaccagctctga
DBGET
integrated database retrieval system
