Siniperca chuatsi (mandarin fish): 122874832
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Entry
122874832 CDS
T08948
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122874832 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122874832 (neil1)
Enzymes [BR:
schu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122874832 (neil1)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122874832 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
122874832
NCBI-ProteinID:
XP_044049174
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All DBs
Position
LG4:11304918..11308842
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AA seq
419 aa
AA seq
DB search
MPEGPELHLASLYVNKMCNGVVFTGPVRKSQVSKNPDVPFTCDAYRIAASSRGKEVKLTL
TPMKSDDPKQRVMTGQADQPMDVVFRFGMSGYFRFTTEEELPKHAHLRFYSKEEPCRVLS
FVDARRFGSWQSNGAWQPNRGPCIMFEYKSFRENVMSHLSDRAFDRPICEVLLNQNYFNG
IGNYLRAEILYRLNIPPFVSARSVLEGLESEDLCENEKPVKNEGTDKKTSDRAKKKKAKG
EMGDLLRLCHTVPLEVVSLGGKGYDPQKADYSVFEAWLKCYNVDGMKSIQDHNGRTMWFK
GEPGPMAPKYSKSPKAKKRAKKDDHDYTDKKKVARSRSASTTKKKVVKQETVTKTLKKEK
DAHQKEAGSKSIKTENTREVHTPQHEKRSTARRRKTSSAEPTAEGPQRRSRRMIRPNDK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggaccagagctccacctggccagcctttacgtgaacaaaatgtgtaatgga
gtggtgtttactggaccggttagaaaatctcaggtcagcaagaatcccgatgtgcccttc
acctgtgatgcctatcgcatcgcagccagttccagggggaaggaagtgaagctcacactt
acgccaatgaaaagtgatgatccaaaacagagagtgatgacaggacaggcagaccagccc
atggacgtagtctttcgcttcgggatgtcgggctatttccgcttcaccacagaggaggag
ctgcccaaacatgcacatctgcgtttttattccaaagaggagccctgcagagtgctgagc
tttgtggatgcacgcaggtttggcagctggcagtccaatggggcgtggcagcctaacaga
gggccctgcatcatgtttgagtacaaaagcttcagggagaacgttatgtcgcacctgtcc
gaccgcgccttcgacaggcccatctgtgaagttctgctcaatcagaattacttcaacggt
atcgggaactacctgagggctgaaatcctttacaggttgaacatcccaccttttgtgtct
gccaggagcgtactggaaggccttgagtcagaagatttatgtgagaatgagaagcctgtg
aaaaatgagggcacagacaaaaagacctcagacagagctaaaaagaaaaaggcgaaaggg
gagatgggtgacctgctcagactgtgtcatacagtacctctggaagtggttagcctaggt
ggaaagggctacgatccccagaaggcagactactctgtctttgaggcctggctgaagtgt
tacaacgtggatggaatgaaatctatccaggaccacaatggcagaactatgtggttcaaa
ggagaaccaggccccatggcgcctaaatattcaaagtcacccaaggcaaaaaagagagca
aagaaagatgaccatgattacacagacaagaaaaaggtggccaggagtcgctccgcaagc
acaacaaagaaaaaggtggtcaaacaggaaactgtgaccaaaacgctaaagaaagaaaag
gacgcgcatcagaaggaagccggatccaagagtataaagactgaaaatacccgggaagta
cacacgcctcagcatgaaaagagatcaactgcacgtaggaggaagaccagcagtgctgag
ccaacagctgaaggtccacagaggcggagccggagaatgatcagaccgaacgacaaataa
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