Siniperca chuatsi (mandarin fish): 122875009
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Entry
122875009 CDS
T08948
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
schu00535
]
122875009 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
122875009 (gpc6a)
Proteoglycans [BR:
schu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
122875009 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
Others
122875009 (gpc6a)
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Ortholog
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GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Serglycin
Motif
Other DBs
NCBI-GeneID:
122875009
NCBI-ProteinID:
XP_044049618
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Position
LG1:complement(13277319..13515607)
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AA seq
594 aa
AA seq
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MTLACCYCANSVCYYLRKLSYYNQCCHHMTVFSVRTIQMLPSKMRIICTPAEDKSQSWRH
GTKQRQWRSCRICEGMAAKSEHLRVCPQGYTCCTSEMEDKLSQQSKLEFENLVEESSHNM
RTTFVSRHKRFDEFFLELLDNSEKSLNSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGN
VNLEEMLNDFWSRLLERMFQLLNSQYHFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRA
FIAARTFVQGLMVGREVANRVAKVNVVPACVRALTKMLYCPYCRGMPGLKPCPNYCHNVM
RGCLANQADLDAEWNLFIDAMLLVADRLEGPFNIEAVIEPVDIKISEAIMTMQDNSMQVS
AKVFQGCGQPKPSGIGRSARGISNVFSARFRPYTPEERPTTAAGTSLDRLRVVWRTMQHS
VIDIKEKLKESKRFWSNLPDDICAKGKLTESDEEQCWNSHTKGRYFPEVVKEGLTNQVNN
PEVDVDITRPDTLIRQQIMALRVMTNKLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCT
TEFVFVGTEAPVIGADRSDERAAASGKSLSRGPSLLLVMVTLTLPLWAMQTQWR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacgttagcatgctgctattgtgcaaatagtgtatgctactacctcagaaagctaagc
tactacaaccagtgctgtcaccatatgacagttttctcagttaggaccatccagatgttg
ccgagtaaaatgaggattatctgtactccggctgaagacaaaagtcaatcttggagacac
gggacaaagcagagacagtggagaagttgtcggatctgtgagggaatggcagcaaaaagt
gagcacctgcgtgtctgtcctcagggatacacctgctgcacatccgagatggaggacaaa
ctcagccagcagagcaaactggagttcgagaacttggtcgaggagagcagccacaatatg
aggacgacttttgtctcgaggcataaaaggtttgatgagtttttcttggagctgctggac
aattctgagaagtctctcaacagtatgttcacacggacgtacgggaagctgtatatgcag
aactcggaggtgttccaggacctgttcactgagctaaagcgctactacacagggggcaac
gtcaacctggaggagatgctgaatgacttctggtccaggctgctagagcgcatgttccag
ttactcaactcccagtaccacttcacagacgactacctcgagtgcgttagtaaatacaca
gatcagctaaagccctttggagatgtgcccaggaaactgaaggcccaggtcaccagggcc
ttcatcgctgcacggacgtttgtccaggggctaatggtgggtcgggaggttgccaacagg
gtcgctaaggtgaatgtagttccagcatgtgtcagagccttgaccaagatgctgtactgt
ccatactgtcgcggcatgcctgggctgaaaccctgtcccaactactgtcacaacgttatg
aggggctgtctagcaaaccaggcagacttagatgctgaatggaacctcttcatcgatgcg
atgttactggtggcagacagactggagggacccttcaacattgaagcagttatagagcca
gttgacatcaagatctctgaggctatcatgaccatgcaggacaacagcatgcaagtgtca
gccaaggtttttcaagggtgtggccaaccaaagccatcaggaataggcaggtctgcacgt
ggcatctccaatgtgttcagtgctcgcttcagaccctacacccctgaagagaggccaacc
acagcagctggaacaagcctggatagactgagggttgtgtggaggacaatgcaacacagt
gtgattgacatcaaagagaagttgaaggaatccaagaggttctggtccaacctgccagat
gacatctgtgccaagggcaagctcacagagtctgacgaggagcagtgctggaacagccac
actaagggcagatatttccctgaagtggtaaaggaaggtcttaccaaccaggtgaacaac
ccagaggtggatgtggatatcaccaggcctgacacactcatacgacagcaaatcatggct
ctacgtgtcatgaccaacaagctaaagaacgcctacaatggaaatgacatctacttccag
gactccagtgacgagggcagtagttctggcagtggcagcggctgctctgacggctgcaca
actgagtttgtttttgttggaacagaggctcctgtaattggagctgacagaagtgatgaa
cgcgcagcagcctcaggcaagtcactttcccgcggaccctccctactgctggtgatggtg
accctcacactcccactctgggcaatgcagactcaatggagataa
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