Siniperca chuatsi (mandarin fish): 122875101
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Entry
122875101 CDS
T08948
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
schu01001
]
122875101
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122875101
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122875101
Protein kinases [BR:
schu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
122875101
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122875101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-C3HC4_2
zf-C3HC4
PRANC
USP7_ICP0_bdg
TTC3
Motif
Other DBs
NCBI-GeneID:
122875101
NCBI-ProteinID:
XP_044049818
LinkDB
All DBs
Position
LG4:6011020..6023786
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AA seq
977 aa
AA seq
DB search
MDGRTGKHETGNTAVIIVENEAESMPVQEEKSGATGQNYLDTCPVCRLNFHSREPKLLPC
LHSFCKKCLPSPSRNLATTEPPNSQVDSATKPLNVIRCPVCRQECMEVDVMENVFVKDSV
EAPSSTVERTVQLCMTCDDNTEAAGFCVECVEYLCATCVEAHQRVKFTKDHTIRQKAEVS
HEVQGVSTQRPMFCDIHKQEALKLFCETCDLLTCRDCQLVKHKDHNYQFLEDAYKNHKQH
MESMTHQLQEKRKLIEEVSNSINNGLLQVDQNRMSVHNEIKKSICSLILEINKKGKMLVN
QLEAVTKDHESVLRKQQEDIGYLSRHLDHVINFTKWATARNGGTALLYCKRLILFQIGNL
LRAKCSTSFIPQSTARFQCRSSYWASNVDLGSVVVESVPGHQLGGFQGIPHQLSHPGQGP
SGSPHSFALGAPNNTLAQLQMQVEKLNPQAHWQPQPPPPPWTLYQSVRLQRTVPGPLQGD
SPSHSMPPQPGRRFMVPPPNHVSPTSSLPSPGFTPQPLRGMGSISSYQPKPMDVFSSSPM
YTHITPLPISGGIGSPHSRQTIEPTYLNRRNDSGGPIYMLKPNYPQSLPPSLPHRNVQGQ
QNSPGYAAVSQEEKTGTVSWKPPETQQASGAVGSAVKKRRRSSPGPIIVIKDEPDDDSSY
VQTTQRASLPDSTGDQPQISTQVPTLQSTDDKPYSPSQPPSSPRDQSKTNAPSHICSLEG
EQQVDQHQAPLEDSNEALCAVCQTGGELLCCDKCPKVFHLSCHVPTLLKSPSGKWFCSFC
RDLSVPEMEYESKPEAKTIKKDPDSEGGFPPVDKRKCERLLLHLFCSDLSSDFQDPVSPS
VCVNSRLTIKGPMYLSPVKKRLEAKESLCYQSPAEFVSDIRLVFRNCAVLSEADNEVTMA
GRKLQELFEEHLRIVFPDQTFPQIKLEMIPTAPPDSQLSSLDNISQPAKRQRTCSDSQDT
PSCPSGEEGVLRKHKSS
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgcacaggaaaacatgagacgggaaatactgctgtcatcatcgttgagaac
gaagctgagagcatgccagtacaagaggaaaagtccggtgcaaccggccaaaattacctg
gacacttgccccgtttgccgtctaaactttcacagccgagagcccaaacttctgccctgt
ctgcactctttttgcaagaaatgtttgccttcaccctcgaggaatttggccacgacagag
ccgccaaactcccaggttgacagcgcgaccaaaccactgaatgtgatccgctgtccggtg
tgcaggcaggagtgtatggaggtagatgtaatggaaaacgtctttgtgaaggactcagtt
gaggctcccagcagcacagtggagaggacagtccagctctgtatgacctgtgatgacaac
actgaagctgctgggttttgtgtggagtgtgttgagtacctctgtgccacctgtgtggag
gcccaccaaagagtcaaattcaccaaagaccacaccatcagacagaaggcagaagtatca
catgaggtccaaggtgtgtcgactcagaggccgatgttctgtgacatccacaaacaagag
gcactgaagctgttctgtgagacctgtgacctgctaacctgtcgtgactgccaactagtc
aagcacaaggaccacaattaccagttcctggaagatgcttataaaaaccacaaacagcac
atggagagcatgacccatcagctgcaggagaaaaggaaactgattgaagaggtgtcaaac
tccataaacaatggacttcttcaggttgatcagaaccgaatgtctgttcataatgaaata
aagaaatccatctgcagtttgattctcgagataaacaagaagggcaagatgctagttaat
caacttgaggctgtaacaaaggatcatgagagtgtcttacgaaaacaacaggaggatatc
ggctatttatccagacacctggatcatgtcatcaacttcaccaaatgggccacagccagg
aatgggggcacggccctcttgtactgtaaacgtttgattctgtttcagattggaaacctc
ctgcgggcaaaatgtagtacctcgtttataccacagagcactgcacgcttccagtgtcga
tcctcttattgggcctcaaatgttgatctgggctctgtagtggtggagagtgtaccaggc
caccagctgggtggttttcagggtatccctcatcagctctcccaccctgggcagggcccc
tcaggctcgccccacagctttgcactgggagcacccaataatactctggctcagctccag
atgcaggtggaaaagctaaacccgcaggcccactggcagccccagccacctcctccaccc
tggacattgtaccagagtgtccgactacagcgaaccgtaccagggcccctgcaaggagac
tctccctcccacagtatgcctccccaaccaggccgcaggtttatggtgcctcctcccaac
cacgtcagcccaactagcagcctaccgagtcctgggtttacaccccagcctctgaggggg
atgggaagcatctccagctaccaacccaaacctatggatgtattttcctcttcacctatg
tacacccatataacaccgctgcccatcagtggtggcatcggttcacctcactcacgacag
acgattgagcccacgtatctgaataggaggaacgattcaggtggtcctatatatatgctg
aaaccaaactatccccagagcctgccaccttctttgccacacagaaatgtgcaaggacag
cagaattcaccagggtacgctgctgtatcccaggaggagaaaacaggtactgtttcctgg
aaacctccagaaacacaacaggctagtggagcagtgggctcagctgtcaagaaaagacga
aggtcgtccccagggcccataatagtcatcaaagatgagccagatgatgacagtagctac
gtacaaaccacccaaagagctagcctccctgacagcacaggtgaccaaccccaaatcagt
acccaagtcccaactcttcaaagcacagatgacaaaccctatagcccgtcacagcctcca
agcagcccacgggaccagagtaagactaatgctccaagtcacatctgttcactggaagga
gaacagcaggtagaccagcaccaagcgccgctggaagactctaatgaagccttgtgtgct
gtgtgtcagactgggggagagctgctatgctgcgataagtgtcccaaggtttttcacctt
tcgtgccatgttccaactctcctcaaatctcccagtgggaaatggttttgctctttctgc
cgtgacttgtcagtgcctgagatggagtatgaaagcaaacctgaagccaaaacaataaag
aaggatccagattctgaaggaggatttccccctgtggacaaacgaaagtgtgagaggctg
ttgctgcacttgttttgcagtgacctgagttcagactttcaagatcctgtatccccctcg
gtatgtgttaatagcaggctgactataaagggaccaatgtatctttcccctgtgaaaaaa
cgactggaggctaaggagagtctgtgctaccaaagccctgcagagtttgtatcagacatc
aggctcgtctttaggaactgtgcagtcctcagtgaggctgacaacgaggtcaccatggcg
ggcaggaagcttcaggagctgtttgaagagcacctgaggatcgtcttccctgaccagacc
tttccacaaatcaaactggagatgatacctaccgcccctcctgactctcaactctcatct
cttgacaatatatcccagcctgcaaagcgccagcgcacatgttcagactcccaggataca
ccaagctgtcccagtggagaggagggagtactacgaaagcacaaatcttcttaa
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