Siniperca chuatsi (mandarin fish): 122875103
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Entry
122875103 CDS
T08948
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122875103 (rfx4)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Other basic domains
RF-X
122875103 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
122875103
NCBI-ProteinID:
XP_044049823
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All DBs
Position
LG4:complement(15868357..15889219)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNMSNDEHEEKENNRASKPHSTPA
TLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSPTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITK
QTLYTMEDSQEEHRQLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKGEGSTAEREEEFTLTETTPTSPSPGSFSPARSVHSVGVSSASSPTAAVSPEYTGV
TSTTGAVQSYTWSLTYTVTTAGGSAPEAGQQLSCMRSSAPVPPPSSAHRMPVYAHREEHG
YTGSYNYGSYANQHPHSIQSQYPSLAHDPAIPAPLHYSAYHRSSAQYQLNGQMSRMEPCL
MGSTPRLHPAPVAPRWPDVSPANSCYTSPPMHSSRYATSGDMYSPLGPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgatatggattccacagaaagttggattgaaaga
tgcctcaacgagagtgagagcaagcgatactccagtcacacgtctctggggaacatgtcc
aacgatgaacatgaagaaaaagaaaacaacagagcctctaaaccacattcgacaccggct
actctggaatggctagaagagaactatgagatagccgaaggagtgtgtatcccccgaagt
gccctctacatgcattacctagacttcagtgaaaagcatgacacacagcctgtgaacgcg
gccagctttggaaagatcataaggcaacagtttccagcgttaactaccagaagacttggg
acaagaggccagtctaagtatcactactacggcatagcggtaaaggagtcctctcagtat
tatgacgtgatgtactccaaaaagggagcagcgtgggtgaacgagacgggcaagaaagag
gtcacgaagcagacagtggcgtattcaccgcgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacctaaatttgcccgccagcctgccagaagagagggtgtcaacc
ttcatcatgatgtacagaacgcactgtcagaggatactagacactgttattcgagccaac
tttgatgaggtccaaagcttcttgctgcacttctggcagggcatgccgccccacatgctc
cctgtcctcggctcccccacggtggtgaacatagtaggtgtttgtgactccatcctctac
aaggccatctctggggtgctgatgcccaccgtcctgcaagcactacctgatagtttgact
caggttatccgaaaatttgccaaacagctcgacgagtggctaaaaatagcacttcacgac
cttcctgaaaacctgaggaatatcaaatttgaattatccaggagattttctcagattcta
aagcggcaaacatcattaaaccatctatgtcaggcatcacggactgtgataaacagtgcc
gacatcacctttcaaatgctggaggactggaggaatgtggacttgaacagcatcaccaag
cagacactttacaccatggaggactcacaagaggagcacaggcagcttattatccacttg
tatcaggagtttgaccgtctcttggaggagcagtctccaatcgaggcgtacattgagtgg
ctggactccatggtggaccgctgtgtcgtcaaggtggcagggaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctcatgtggtcgtgtttcggtaccagagtcatccgg
gatatgaccctccacagcgcgcccagctttgggtccttccacctgatccacctcatgttt
gatgattatgtgctttacctgctggagtccctgcactgccaggagagggccaacgagctc
atgagggccatgaagggagaaggcagcacagcagagagagaggaggaattcacgctgaca
gaaaccacccccacctccccgtctccaggatccttctctcccgctcggtcagtccactct
gtgggcgtttcctctgccagctcccccacagcagctgtgtccccagagtacaccggagtc
acctccaccacaggcgctgttcagtcatatacctggtcccttacatacacagtgacaaca
gcaggcggctccgctccagaggccggacagcagctgtcctgtatgaggagcagcgctcca
gtcccacctccatcctctgcccaccggatgccagtctacgcccacagagaggagcatggg
tatactggtagctacaactatggcagctacgccaaccagcatcctcactcaatccagagc
cagtatcccagtctggctcatgatccggcgatcccagcccccctccactactccgcctac
caccggtcttctgcacagtaccagctcaacggccagatgtctcgaatggagccttgcttg
atgggcagcacgcctcgattgcaccctgcacccgttgccccccggtggccagatgtgtcg
ccagctaacagctgttacaccagcccacctatgcattcatcccgctatgccacctccggg
gacatgtactctcccctgggcccacgcaggaactcagagtacgaacactcgcagcatttc
cccggctttgcctacatcaacggagaggccaccacaggctgggcgaaatag
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