Siniperca chuatsi (mandarin fish): 122875105
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Entry
122875105 CDS
T08948
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
KO
K12183
ESCRT-I complex subunit TSG101
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03250
Viral life cycle - HIV-1
schu03272
Virion - Hepatitis viruses
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122875105 (tsg101a)
03272 Virion - Hepatitis viruses
122875105 (tsg101a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122875105 (tsg101a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122875105 (tsg101a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122875105 (tsg101a)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
122875105 (tsg101a)
Exosome [BR:
schu04147
]
Exosomal proteins
Proteins found in most exosomes
122875105 (tsg101a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
DUF3450
UQ_con
Het-C
FapA
ANG-1
CC_Bre1
Xpo1
SlyX
Exonuc_VII_L
TPR_IF140_C
Prominin
DUF5685
DUF724
Spc7
DUF6468
EMP24_GP25L
FlaC_arch
DUF1664
CCDC138_cc
V_ATPase_I
APG6_N
CCDC90-like
Motif
Other DBs
NCBI-GeneID:
122875105
NCBI-ProteinID:
XP_044049830
LinkDB
All DBs
Position
LG4:17883250..17892855
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AA seq
390 aa
AA seq
DB search
MAVISEGNLKKMLKQYKYRDLTVREITNVISQYKDLKPVMDAYVFNDGSTRDLMSLTGTV
PVSYRGNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQAPYQAFQAAGPPNPSYMPGMPAVSPYGPNPN
PGGYPGYQYPGGNSYPATGGPAHYPTQTPVSTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEEMVSRLDQEVTEVDRNIELLKRKDEELSE
ALEKMENQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcagttattagcgaaggtaacctgaagaaaatgctaaagcaatacaaatacagagat
ctgacagttcgtgagataaccaatgtcatctcccagtacaaggacttgaagccagttatg
gatgcttatgtgtttaatgatggctccacaagagacctgatgagcttgacgggaactgtt
ccagtgagctacagaggcaatgtctataacatcccagtgtgtctgtggttgctggacact
tatccctacaaccctcccatatgttttgtcaaacccacaagtgccatgatgatcaaaact
ggcaagcacatcgatgccaacggcaagatctatctgccttatctacatgagtggaagcat
cctcagtcagacctgtatggtctgattcaggtgatgattgtggtgtttggagaggagcct
cctgtgttttctcgcccaaccacacaagccccctaccaagccttccaagcagctggaccc
cctaacccttcctacatgcctggcatgcctgcggtctcaccctacggcccaaatcctaac
ccaggaggttatccaggataccagtacccagggggcaactcttacccagccactggtgga
cctgcacactaccccacccagactccagtttccacagtgggtccgagcagagatggcacc
attggtgaggacaccatccgcgcatctctgatttcagctgtgagtgataagcttcgctgg
aggatgaaggaggagatggacagagctcaggcggagctggacgccctgaagcgaacagag
gaggatctgaagaaaggacatcagaaattggaggagatggtctcaagactggaccaggaa
gtgactgaggttgacaggaatattgaactgttgaagagaaaggatgaggagctgagtgag
gccttggagaagatggagaaccagtcagagaacaatgacattgatgacgtcattgtaccc
acagctccgctgtacaaacagatcctgaacctatatgctgaagaaaatgcaattgaggac
accatcttctacctgggagaggccctccgcaggggcgtcatagacctggaggtttttctc
aagcatgtacgacttctgtccaggaagcagttccagcttcgtgccctcatgcagaaagcc
cgcaagactgccggccttagtgacctctactga
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