KEGG   Siniperca chuatsi (mandarin fish): 122875105
Entry
122875105         CDS       T08948                                 
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03250  Viral life cycle - HIV-1
schu03272  Virion - Hepatitis viruses
schu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122875105 (tsg101a)
   03272 Virion - Hepatitis viruses
    122875105 (tsg101a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122875105 (tsg101a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:schu04131]
    122875105 (tsg101a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:schu04147]
    122875105 (tsg101a)
Membrane trafficking [BR:schu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    122875105 (tsg101a)
Exosome [BR:schu04147]
 Exosomal proteins
  Proteins found in most exosomes
   122875105 (tsg101a)
SSDB
Motif
Pfam: UEV Vps23_core HAUS1 DUF3450 UQ_con Het-C FapA ANG-1 CC_Bre1 Xpo1 SlyX Exonuc_VII_L TPR_IF140_C Prominin DUF5685 DUF724 Spc7 DUF6468 EMP24_GP25L FlaC_arch DUF1664 CCDC138_cc V_ATPase_I APG6_N CCDC90-like
Other DBs
NCBI-GeneID: 122875105
NCBI-ProteinID: XP_044049830
LinkDB
Position
LG4:17883250..17892855
AA seq 390 aa
MAVISEGNLKKMLKQYKYRDLTVREITNVISQYKDLKPVMDAYVFNDGSTRDLMSLTGTV
PVSYRGNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQAPYQAFQAAGPPNPSYMPGMPAVSPYGPNPN
PGGYPGYQYPGGNSYPATGGPAHYPTQTPVSTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEEMVSRLDQEVTEVDRNIELLKRKDEELSE
ALEKMENQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggcagttattagcgaaggtaacctgaagaaaatgctaaagcaatacaaatacagagat
ctgacagttcgtgagataaccaatgtcatctcccagtacaaggacttgaagccagttatg
gatgcttatgtgtttaatgatggctccacaagagacctgatgagcttgacgggaactgtt
ccagtgagctacagaggcaatgtctataacatcccagtgtgtctgtggttgctggacact
tatccctacaaccctcccatatgttttgtcaaacccacaagtgccatgatgatcaaaact
ggcaagcacatcgatgccaacggcaagatctatctgccttatctacatgagtggaagcat
cctcagtcagacctgtatggtctgattcaggtgatgattgtggtgtttggagaggagcct
cctgtgttttctcgcccaaccacacaagccccctaccaagccttccaagcagctggaccc
cctaacccttcctacatgcctggcatgcctgcggtctcaccctacggcccaaatcctaac
ccaggaggttatccaggataccagtacccagggggcaactcttacccagccactggtgga
cctgcacactaccccacccagactccagtttccacagtgggtccgagcagagatggcacc
attggtgaggacaccatccgcgcatctctgatttcagctgtgagtgataagcttcgctgg
aggatgaaggaggagatggacagagctcaggcggagctggacgccctgaagcgaacagag
gaggatctgaagaaaggacatcagaaattggaggagatggtctcaagactggaccaggaa
gtgactgaggttgacaggaatattgaactgttgaagagaaaggatgaggagctgagtgag
gccttggagaagatggagaaccagtcagagaacaatgacattgatgacgtcattgtaccc
acagctccgctgtacaaacagatcctgaacctatatgctgaagaaaatgcaattgaggac
accatcttctacctgggagaggccctccgcaggggcgtcatagacctggaggtttttctc
aagcatgtacgacttctgtccaggaagcagttccagcttcgtgccctcatgcagaaagcc
cgcaagactgccggccttagtgacctctactga

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