Siniperca chuatsi (mandarin fish): 122875120
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Entry
122875120 CDS
T08948
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122875120 (lingo1a)
Membrane trafficking [BR:
schu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122875120 (lingo1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
122875120
NCBI-ProteinID:
XP_044049860
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All DBs
Position
LG4:4963595..5093720
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AA seq
615 aa
AA seq
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MAAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETRLLDLSKNRIRTINPDEFANFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGNLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggaagcgactgggcacagctacctggtggcttgctggcagcccattctg
atcctgatgctaggcactgtgctgtctggctccaccacaggctgtccatcccgctgtgag
tgtaatgttcaagagcgctctgtgatgtgccaccgcaagaagctcatgacagttcctgag
ggcattcctgcagaaacaagactgttggacctcagcaagaaccgcattagaaccatcaac
ccagacgagtttgccaactttccgaacctcgaacacctggagctcagtgaaaacacgatc
tccactattgaacctggagcgttcaacaacctttatggcttgcggacattggggctgcgt
agcaacaagcttaagctgatacagctcggtgtcttcacaggcctgagcaatctcacacag
ctggacataagtgagaacaagattgtcatcctgttggactacatgttccaggatttgtac
aacctccggtctttagaggtgggtgataacgacctggttttcatctcccaccgggctttt
catggcctaagtagccttgagcacctgagtcttgagaagtgtaacttgtcctctgtgcca
acagaggcttttacccatcttcacagtttgatcactctcaggctgcgtcacctcaatatc
aatgtcatacgggattactcctttaaacggctctatcggctgaaagtgttggaaatagcc
aattggccatatttggatacgatgaccccaaattgcttgtatggattaaatctcacctcc
ctgaccattgcaaatgccaacctgaccacaattccttatgtagccctgcggcacttggtt
tatttgcgctttcttaatctttcatataaccctatccataccattgaggggaataagctc
catgatcttctgcgtctccaggaatttcacctggtaggaggcagactggcaatgattgag
ccctactctttccgtggtctaaactacctgaagattctaaatgtgtctggaaactctctt
agcactttagaggagtctgccttccattcagttggcaacctggaaacccttgccttgtat
gataatcccctggcctgtgactgccgactgttatgggttttccgacgacgctggagactg
aacttcaacaggcagcagcctacctgtgcctcccctgagtttgtccaaggcaaagaattc
aaagactttccggatgttctgcagcctaactacttcacgtgtcgtaaatctaggattagg
gatcgtaaaccccagcagaaatttgttgacgagggagccattgttcattttgcttgccag
gcagatggagatcctgctccagtgataatgtggctatccccacagaaaaagtttatcacc
accaagacaattggaaggctctcagtgttgccagacggtaaccttgaggtgcgctatgcc
cagattcaagacaatggtacatatgtgtgtatagctagcaatgcaggcggaaatgacacc
tctcttgctcacctgcacattcatagctactcgcctgactggccacaccagcccaacaag
acttttgcgttcatctccaaccagcccacagaaactggtgctaatggtacaagagccaat
gttcctttcccctttgatataaagacattgatcattgcgaccacaatgggcttcatctct
tttctcggcgttgtcttgttttgcctggtactgctcttcctttggagcagaggtaaaggc
aacactaagcacaacattgagattgagtatgtgccacggaaatcggatgctggcatgagc
agcagcacagtggatgctcctcgcaagtttaacatgaaaatgatttaa
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