Siniperca chuatsi (mandarin fish): 122875202
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Entry
122875202 CDS
T08948
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122875202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122875202
03036 Chromosome and associated proteins [BR:
schu03036
]
122875202
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122875202
Coactivators
SAGA/TFTC/STAGA complex
122875202
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122875202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122875202
NCBI-ProteinID:
XP_044050011
LinkDB
All DBs
Position
LG4:32936698..32970176
Genome browser
AA seq
990 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLGDRKAPAASYSDGKREGAPPAASQFSGK
VRDQVGSLEQPQQGHPKAGLNQEPGANEPLSGKTATSSTSSAAAGAVITAGAGLQAVGAS
PPAASSVPGPATLNTQSAAASFHRAAVPGPSAAPSALIAPAAEAAIRTASPGLQSLNGNS
GAVKLVNSPAAPPPAGANTVISAVSAGGSAIVASMASQPSFPVPQSPAASPAVTLQRHPS
PVASVAQNGVDPKGAQLVVPGAPSPSASSSQVVNHSNPLMHTKMLVPSQPVSGNSVILTS
TPPPAAQSPISHAQTGTSTATVALAAAGLKPAVNGVGQPAVAVVRPPGAPMVATSIQQQR
PGLVASSTRAAAPQPPLAVRPQQQTTIQLPPGFSMPPGMVLVRTETGQLVMVPQQVLAQA
QAKTQQGQAVANITQRPATPTAGATIRVTTANTAPQTVRLASPAQTRMVQSPSTTTVQKA
ITVAPGAAAVSVKMTAPQKAQTVITAGGTPVAKPAGVPSTPLTGTTPTPTATPPGRVNVV
SQEMQENVKKCKNFLATLIKLASHNSPSPDTSKNVKALVQDLLDAKIEPEEFTTRLQAEL
KSSPQPYLIPFLKKSLPALRQSLLSSQQSLVTPTPSTSAAPLAAPGSVTTAAIRPRLPIG
PAGGTVRLNPPLTNTLAVGRAGVQTVQTRTPVVFSQTLRPQGTLVRGPTTIIGKVNLAGQ
ANQRKLSDPGGGTFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIRSCKDESFLP
TGLLHRRILDTAKKLGVTEVPLEVVNFISHATQSRLRSLLEKVSAVAQHRTDGGKDEEHH
EQTSDVRSQLRFFEQLERMEKQRKDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQ
ELAQMRQRDANLTALAAIGPRKKRKLDSPGGAAAGTEVASGSGAGSSTAASSRQQLRQRI
TRVNLRDFIFCLEQDRSTARSLMLYKALLK
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtggatgagaaagca
gttagcgacttagttggctctctggaatcacaactgggcgaccgaaaggctcccgctgct
tcatattccgacgggaaacgggagggagctccgccggcggccagccagttctcagggaaa
gtgcgcgatcaagtggggtctctggagcagccgcaacaagggcatccaaaagcggggtta
aaccaggaacccggcgctaatgagccgctctccggcaaaaccgccacctcctctacctcc
tctgccgccgccggggccgtgataaccgccggagccggtctgcaagcagtcggagcatct
cctcccgcggcttcctccgtaccgggacccgcaactttgaacactcagtccgcggctgct
agcttccaccgggctgccgtcccgggtccgagcgcggctcccagcgccctcatcgccccc
gcggcggaggcggctatcaggaccgcttctcccggattacaaagtttaaacggcaactct
ggagccgtgaagttggtgaactcccccgcggccccccctccggccggggccaacactgtt
ataagtgctgtcagcgccggcggctccgctatcgtcgcctccatggcttctcagcctagt
tttccagtacctcagtccccggcggcgtcccccgctgtgactttgcagaggcaccccagc
ccggtggccagcgtggcccagaacggggtagaccctaagggggcccagctggtggtcccg
ggtgccccctccccctcagcctccagctctcaggtcgtgaaccacagcaaccctctgatg
cacaccaagatgttggtgcccagccagcccgtttccggaaactccgtcatcctgacgagc
acccctccgcccgccgcccagtcccccatcagccacgctcagaccgggaccagtacggct
actgtggccctggccgctgccgggctgaagcctgcggtgaacggagtgggccagcctgcg
gtggctgtggtgaggccgccgggcgctcctatggtggccacctccatccagcagcagaga
ccggggctggtggcgagctcgaccagagcggccgctcctcagcctcctctggctgtccgg
cctcagcagcagaccaccatccagctgccccccgggttcagcatgcctcccggtatggtt
ctggtccggacggagacgggtcagctggtgatggtccctcagcaggttctggcccaggct
caggccaagacgcagcagggccaagcggtggccaacatcacccagagacctgcgacgccg
acggccggggccaccatccgggtcaccactgccaacacggctcctcagaccgtccgcctg
gcctcccccgctcagaccagaatggttcagtctccctccaccaccactgtacagaaggcc
atcacggtggcccccggcgctgcagcggtgtcggtgaagatgaccgcccctcagaaggcc
cagacagtgataacggcgggggggacgcctgtcgccaagcctgccggtgtcccgtccacg
cccctgaccggcacgacgcccactcccaccgccacgccccctggcagagtcaacgtggtg
tcccaggagatgcaagaaaacgtgaagaaatgcaagaacttcctcgccacgctgatcaag
ctggcgtcccacaattccccctccccagatacctccaagaatgtgaaggccctggtgcag
gacctgctcgatgctaagatcgagcctgaggagttcaccactcggctgcaggctgagctg
aagtcctccccgcagccctacctcatccccttcctcaagaaaagcctccccgccctgcgt
cagtctctgctcagcagccagcagtctctggtgacgcccacccccagcacctccgcggcc
cccctggccgcccccggctccgtcaccaccgccgccatcaggccgcggctgcccatcggt
ccagccggcggcaccgtcagactgaacccgcccctcacaaacaccctggctgtgggcaga
gccggagtgcagactgttcagactcgtacgcctgttgtcttcagtcagactctcagacct
caaggcacacttgtgaggggacccacaactataattggcaaagttaacctggcaggtcaa
gccaatcagaggaaactgagtgacccagggggcgggacattcagagatgacgacgacatc
aacgacgtggcgtccatggccggcgtcaaccttaacgaggaaaacgcccgtatcctagca
accagctcggagctggtcggcacaaagatccgctcctgtaaagacgaatccttcctgccc
accggcctgctgcaccgtcgcatcctggacacagctaagaagctgggtgtgaccgaggtg
ccgctggaggtggtgaacttcatctcccacgccacgcagtccagactgcgctccctgctg
gagaaggtctcggcagtcgctcagcaccgcacggacgggggaaaggatgaagagcatcat
gaacagacgtcagacgttcgctctcagcttcgtttcttcgagcagttggagcgaatggag
aaacagaggaaagatgagcaagagagagagattctgctgaaggctgccaagagtcgcgcc
agacaagaagatcctgaacaggctcgcctgaagcagaaggctaaagagatgcagcagcag
gagttggctcagatgcgacagcgggacgccaacctcacggccctcgccgccatcggccca
cgcaagaaacgcaagctcgactcgccgggaggcgccgcggccggcacagaggtggcctcc
ggctcgggcgcaggctcctccacggccgcctcctcccgccagcagctccgtcagcggatc
acgcgagttaacctcagggacttcatcttctgtctggagcaggaccgctccacagctcgc
tctctaatgctctacaaggcgctgctgaaatga
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