Siniperca chuatsi (mandarin fish): 122875269
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Entry
122875269 CDS
T08948
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122875269 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122875269 (sf3b3)
03041 Spliceosome [BR:
schu03041
]
122875269 (sf3b3)
03036 Chromosome and associated proteins [BR:
schu03036
]
122875269 (sf3b3)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122875269 (sf3b3)
Spliceosome [BR:
schu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122875269 (sf3b3)
Complex B
122875269 (sf3b3)
Complex C
U2 SnRNP specific factors
122875269 (sf3b3)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122875269 (sf3b3)
TFTC complex
122875269 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
122875269
NCBI-ProteinID:
XP_044050160
LinkDB
All DBs
Position
LG4:22012608..22047162
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AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHASKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLIVIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLSEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVSGGFIYTYRLTGGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTSIHTIGQRVIVTDVQESLFWVRYRRNENQ
LIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVVVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcactctacagagagccactggcatcactcatgccatccatgga
aacttctcaggaaccaagatgcaggagattgtcgtttccaggggaaagattttggaatta
ttgcggccagatgccaacacaggaaaggtgcacactctgctcacagtggaggtgtttggc
attgttaggtccctgatggccttcagactcactggaggaaccaaagactacattgttgtt
ggaagtgacagtggtcgtattgtcatcctggaatatcatgcatcaaaaaacatgtttgag
aagatccaccaggaaacatttgggaagagcggctgccggcgcattgtccccggacagttc
ctggctgtcgacccaaaaggcagagctgttatgataggagcgatagagaaacagaagctg
gtttacattctgaacagagatgcagctgcaagattgaccatctcctctccactggaagcc
cataaagcaaacacgctggtctaccatgttgtaggagtcgatgtcggctttgaaaatccc
atgtttgcctgcctcgaaatggactatgaggaagctgacaatgacccgacaggagaagct
gccgccaacacgcaacagacactcaccttttacgagctggaccttggcttgaatcatgtg
gtccgcaaatacagtgaggctttggaagagcatggaaatttcctcatcactgttcctggt
ggttcagatgggcccagtggagttctgatctgctccgaaaactacatcacttataagaat
tttggagaccagcctgacattcgctgtcctatcccacgacgcaggaatgacctggatgac
ccggagcggggcatgatatttgtctgctcagccacccacaagaccaagtccatgttcttc
ttcctggcccagactgagcagggagacatctttaaggttaccctggaaacagatgaagaa
atggtcacagaaatcaggttgaaatactttgacacgatccctgtggcaacagccatgtgt
gtcctgaagactggcttcttgtttgtgtcttcagagtttggaaaccattacctttaccag
atcgcccacttgggtgacgatgacgaggagcctgagttctcctctgcaatgccgctggaa
gagggagacaccttcttcttccaaccccgccccctcaagaaccttgtgttggtggacgaa
caggagaacttatcacccatcatgtcctgtcagattgctgatttggccaatgaagataca
ccgcagttgtatgtcgcctgtggacgaggaccccggtctactctgagggtccttagacat
ggactagaggtatcagagatggctgtgtctgagctgcccggtaaccctaatgctgtgtgg
acagtacgcagacatgtggaagatgagtttgatgcctacatcattgtatctttcgtaaac
gctactctggttctgtccatcggggagactgtagaggaagtgacagattctggatttctg
ggaacaacgcctactctctcctgctcactgctcggtgaagacgccctggtgcaggtgtac
ccagacggtatccgccacatccgagcggacaagcgtgtgaatgagtggaagactcctggc
aaaaaaaccattgtccgctgtgctgtgaaccagcgacaggttgtaatcgcactcactgga
ggggagctggtctactttgagatggacccgtccggccagctgaatgagtacacagagcgg
aaggagatgtctgctgatgtggtttgtatgagcctggctaacgttccacctggtgagcaa
cgctcgcgattcctggccgtgggactggttgacaacactgtccgaataatctccctggac
ccttcggactgcctccagccgttgagtatgcaggcccttccagcccagccagagagtctg
tgtattgtcgagatgggaggggtagagaaacaggatgaacttggagaaaagggaaccatt
ggcttcctctaccttaatataggacttcagaatggtgtgttgctgaggactgtgctggac
ccagtgacgggtgacctgtcagataccaggacacgctacctggggtcacgacctgtcaaa
ctcttcagagtcaggatgcagggacaggaagctgtgttggcaatgtccagtcgttcctgg
ctcagctactcctaccagtctcgcttccatttgacccctctgtcatatgagactctggag
tatgcctctggctttgcctctgagcaatgccctgaaggcatagtagccatttccaccaac
actctgagaatcttggctttggagaaattaggagcagtcttcaaccaggtggcctttcct
ctgcagtacactcccaggaaatttgtaatccacccggagaccaacaacctcattgtgatc
gagactgaccacaatgcctacactgaggcaaccaaagctcagagaaagcaacagatggct
gaggagatggtggaggctgctggtgaggatgaaagagaactggctgctgagatggctgct
gccttcctcaacgagaatctctcggaagccatttttggggcacctaaagctggagcagga
cagtgggcctcactggtgcgtctcgtcaaccccatacagggttcaacactggaccaggtg
cagctggaacagaacgaagctgcattcagtgttgcagtgtgtcgtttccccaacacagga
gatgattggtatgttctggtgggtgttgccagagacatgattctcaaccccagatcagtg
agcggcggctttatctacacctatcggctcaccggtggaggggagaagctggagtttgtg
cacaagaccccggtagaggacgtgcctttggccattgctccgttccagggacgagtcctg
gtgggagtggggaaactgctgagaatctatgacctgggcaaaaagaagctgcttcgcaag
tgtgaaaacaagcacgtacctaacctggtgactagcatccataccatcggccagcgtgtg
atcgtgactgatgttcaggagagcctgttctgggttcgttaccgacgcaacgagaaccag
ctcatcatcttcgctgatgacacacacccccgctgggtgaccacggcctgtctgctcgac
tacgacaccatggcctctgctgacaagtttgggaacatcagcatcgtgcgtcttcccccc
aacaccagcgatgatgtggatgaagaccccacagggaacaaagctttatgggacagagga
ctccttaatggagcatcacagaaggctgaggtggtagtgaactaccacgtaggagagaca
gtgttatctctccagaaaaccaccctgatccctggaggttcagagtctctggtctacacc
actctgtctggaggcattggcatactggtcccattcacctcgcatgaggaccatgacttc
ttccagcatttagagatgcatatgcgctctgagttccctccactgtgcggcagagaccat
ctcagctttagatcctactacttcccagtcaagaatgtgattgatggagatctgtgtgag
cagtttaacagtatggaccctcacaagcagaaaagtgtggcagaagagctggacaggaca
ccacccgaggtctctaagaaactggaggacattcgcactcgctacgccttctaa
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integrated database retrieval system
