Siniperca chuatsi (mandarin fish): 122875271
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Entry
122875271 CDS
T08948
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122875271 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122875271 (exosc6)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122875271 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122875271
NCBI-ProteinID:
XP_044050162
LinkDB
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Position
LG4:complement(21927924..21930140)
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AA seq
271 aa
AA seq
DB search
MPTDTKRVRGPEVSQSPSLFLCKPAASHGPRADGRQRDQVDVRPVFVRCGLVSQAKGSAY
IEAGNTKLMCCVYGPRETERKDETDMKCGRLTTDMRFAPFSCPERGSWIQGSQDKDLSLM
LHESLQPAVCLHKYPRSQIEVNVMVLENSGSVLAHAVTCASLALADAGIEMYDLVLGCSI
RQDGASYVVDPSYTEENSCSSVSSDNQGGLTVAFLPSLNQISGLQSDGEMTEETLTAGVR
TCIEGCYKLYPVIQQALARAVRRAAPPPSES
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgataccaaacgtgtacgcggcccagaagtgtctcaaagtccgtctttgttt
ttgtgcaaaccggcggcctcgcacggccctagagcggacggtcggcagcgggatcaagtg
gacgtccggcctgtttttgtccggtgcgggctggtgagccaggccaaagggtccgcgtac
atcgaggctggaaacaccaagttgatgtgctgcgtttacggccccagagaaacagagcgg
aaagatgagaccgatatgaaatgtggaaggttgactactgacatgcgttttgctccattt
tcctgcccggagaggggctcctggattcaggggagccaggacaaggacctctccctgatg
ctgcatgagagtctgcagccagctgtgtgcctccacaaatatccccgctctcagatcgag
gtcaacgtgatggttcttgagaacagcggttcagttctggcccatgcagtcacatgcgct
tctctcgctctcgcagatgcagggattgaaatgtatgatctggtgcttggttgttccatc
cgccaggatggcgcctcttatgtggttgacccttcttacacggaggaaaacagctgcagc
tcagtcagcagcgataaccagggcggtctgactgttgcgttcctccccagcctgaaccag
atttctgggctgcagtcagatggagaaatgactgaagagactctgacagctggggttcgg
acctgcattgagggatgctataaactgtacccggtcatccaacaagccctggccagggct
gtgcgcagggctgctcccccaccatcagagagctga
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