KEGG   Siniperca chuatsi (mandarin fish): 122875310
Entry
122875310         CDS       T08948                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04510  Focal adhesion
schu04512  ECM-receptor interaction
schu04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:schu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122875310 (lamb4)
   04518 Integrin signaling
    122875310 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122875310 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB1 LAMB4 F5_F8_type_C
Other DBs
NCBI-GeneID: 122875310
NCBI-ProteinID: XP_044050213
LinkDB
Position
LG4:complement(33442228..33500735)
AA seq 1802 aa
MIFIIFIVFFPGAQLQDLEDLQDQCPGGLCNRQLGDLMVGRADQLSASSTCGLDGPQNYC
IIGYLEEEQKCFTCDSRLPYNRYHNPNSHRIENVITTFDSERKMKWWQSENGVHQVSLRL
DLETVFQFSHLVLTFKSFRPTAMLVERSKDFGRSWKVFRYFAEDCSLHFPSVSNQPANSI
DDVVCDSRYSGSEPSTDGEVVLKALDPIFEIENPYTPNIQDLITLTNIRVNFTRLFTLGD
TLLGRRRRNPQDKYYYALYNMVVRGSCFCNGHASQCTPVDRGRGDVFTQTGMVHGRCVCQ
HNTAGENCERCQDFHHDTPWRPGGENTADICRRCNCHGHSDSCHFDAAHFAVTGGMSGGV
CDDCRHDRTGPQCERCRPFLYQDPQRATEDPHACIPCDCDPVGSQGGGLCDAQSGRCVCK
DNVEGQRCDRCKHGFFNLRQDNPAGCQVCRCHVLGSVRSCDQLTGSCECDHLAIGPLCDR
CLAGFWGLGNSVFRCSPCDCDIGGAHSTTCSPQDGQCHCLPSMVGRRCSDPAPGYFLAPL
DYFLYEAELAAPLHGGSSSSPSSTSPSSSSSSVLNPAVLPKCEQYFREQGYDFKFTNGRV
VLVQRTRRLTRRRRQGQSSIPLDPGHALQIVPRQRSVDQPITWTGLGLVRVLEGAGLRFT
VDNLPSSLDYQLVIRYEPEALSDWLASVNIITVSLGNGSCSSEPTRSKSLILPGKSRGVI
LDSPLCLNAGGRYFVDVIFSKQPGSDGSFSSHILIDSMGLIPRIESVQDFCSQSDLDSFR
RFRCIGLAAELGPQESLPQVCEGLIKSMSARIHNGAVLCRCNVVGSLGPSCSKLGGFCEC
KPNVIGRCCDTCAPLTFGFGPDGCKPCECDRRGSMSELCDQVRGQCACRSEVTGRRCDRC
RTGFWGFPFCRQCKCNGLSEVCAEETGECLNCREHATGPNCDRCVEGYYGNPISRQPCQP
CLCPDVQSSGRFFATSCQHDPQSFSLTCNCREGHTGPRCNRCSPGFYGDLALQGASCEEC
PCNNNIDPDDRDACNSLTGECLHCLHNTMGPRCQDCKPGYYGNALDQDCKECSCDRRGTE
VTQCPLGSSCFCDSRTGQCPCRTGVVGVLCDECEDGYWNLDGASGCQPCGCDPVNSFSNI
CNKVTGQCPCRLEFGGRQCDECGENHFGNPDLQCISCDCNMEGTERPSCNSETGECICRI
GITGIFCDECAPGYDSAFPACEECHPCTTLWAENVTDVQQAAQRMRTFIPRHRNDLRPTE
SRHRQRMLEMRSKLDGLSNLTGLSPPKVEKVEKLYAMTGKLKDAINPNMILIDPSPLLNT
EIGNIHLEFRKLVNNLKEKLTEDPGDEDEYQEELLDDIQKLHKAFMLDEKRVRNANKALE
DSMDTRQEVKNKLGMCSSRGDLAPLEKKVKEHSAVDLNRKICGGPGLEDCSGCGGALCGL
DLGKRKCGGPNCNGVIPVSQKASETAERVKDQLITVPSRLQESKNKINDAKQTAQDTKDQ
AKDLQDQINDNMDAFEREKNKTKDLILRVKDYLRDEMVPPEDIEKMSQAVLDIQLPRSPN
QIRSMVTDVNNLLSNSTNFQDDLKNLKEHAKTTQDLLQKAQELKERKKKIDVTEINRDIY
EAEKAQDKANDDLETASRDRDMTRDQVQDIKDKLNDIETKLMNRRPEDLKDEIEALKKKT
EQNRETARDAREAADSTLNNTTDTETLDDVMKLFELLKEKNLNRAVQGEAGERLKNITEE
AEKMKRQVKDKLRQIQDLELKIQQLIRSKEDKAAQVYNLLEMVDSLRQEISKRAEGYISC
TS
NT seq 5409 nt   +upstreamnt  +downstreamnt
atgatctttatcatcttcattgttttttttccaggagctcaactccaagaccttgaggac
ctccaggaccagtgccccggtggcttgtgtaaccgccagcttggtgacctgatggtggga
cgagcagatcaactgtcagcctcgtccacctgcggtctggatggaccacagaactactgc
atcatcggatacctggaggaggagcagaaatgtttcacatgtgactcacggctgccgtac
aatcgctatcacaaccccaacagccaccgcatcgagaacgtcatcacgaccttcgactcc
gagagaaaaatgaagtggtggcagtctgagaacggagttcatcaggtcagcctcaggctg
gatctggaaaccgtgttccagttcagtcacctggtcctcaccttcaagagtttccgtcca
acggccatgttggtggagcgttcaaaggatttcggacgaagttggaaagttttccgttac
tttgcagaagattgttcgcttcatttcccttcagtgtccaatcaaccggccaacagcatc
gacgacgtggtctgtgacagcagatactccggatcagagccatccactgacggagaggtg
gtgctgaaagctctggatcccatctttgaaatagaaaacccgtacacaccgaacatccaa
gatctgatcaccttgacaaatatccgtgttaacttcactcgtctcttcacgttgggtgac
actttgctgggtcgaagacgcaggaaccctcaggacaaatattactatgctctttacaac
atggtggtccgaggcagctgcttctgtaacggccacgcaagccagtgtacacctgtggac
cgaggacggggggatgtcttcacccagactggcatggttcatggccgatgtgtttgtcag
cacaacacggccggagagaactgtgagagatgtcaggactttcaccacgacaccccctgg
aggcctggaggagaaaacacagccgacatctgcaggagatgtaactgtcacggtcactcg
gactcgtgtcacttcgacgccgctcatttcgcagtgacgggcggcatgagcggtggtgtc
tgtgacgactgccgccatgacaggacggggcctcagtgtgaacgatgtcgaccttttctg
tatcaggatccacagagagctacagaagacccgcacgcctgcataccatgtgactgcgac
ccggttggttctcagggtggcggtctgtgtgacgctcagagcggtcgatgtgtctgtaaa
gataacgtggagggtcaacgctgcgatcgctgcaaacatggcttcttcaacctgagacag
gacaacccggccggctgtcaggtgtgcaggtgtcatgttttgggaagtgtcaggtcatgt
gatcagctgacaggaagttgtgaatgtgaccatttagcgattggaccactgtgtgatcga
tgtctggcaggtttctggggtttgggaaactctgtgttcagatgttcaccctgtgactgt
gatatcggaggagctcacagcaccacgtgttctccacaggacggacagtgtcactgttta
cccagcatggtgggtcgacgctgctctgaccccgcccctgggtacttcctggctccactg
gactacttcttgtacgaggcagagctcgccgctcctcttcatggaggaagctcttcttct
ccttcttctacttctccttcatcttcttcttcttctgtgttgaacccggctgttttacca
aagtgtgagcagtatttcagagagcagggttacgactttaagttcactaacggacgagtt
gttctggttcagaggactcggcgactcacccgccggaggagacagggacagagcagcatc
cctctggacccgggtcacgccttgcagattgttccccgtcagaggtcagttgatcaacca
atcacctggactggcctgggattggtcagagtgttggagggggcggggcttaggttcact
gtggacaacctcccatcatcattggattaccagctggtgattcgctatgagccggaggct
ctgtctgattggctggcttcagtcaacatcatcacagtgtcgctgggcaacggcagctgc
agcagcgagccgacaagaagtaaatctctgattcttccaggaaagtccagaggggttatt
ctggactctccgctgtgtctgaacgcaggcggtaggtacttcgtggacgtcatcttcagc
aaacagcccggatctgacggctccttcagctcacacatcctgatcgactcgatgggtctg
attcccagaatcgagtctgtccaagatttctgctcccagagtgacctcgactcttttcgc
cgctttcgctgcattggattggctgccgagctcggcccgcaggagtcactaccacaagtc
tgtgagggactcattaagagcatgtcggcacgaatccacaacggagccgttctttgcagg
tgtaacgtggtcggctctctcggaccatcctgcagtaaactgggagggttctgtgaatgc
aaacccaatgtgattggccgttgctgtgatacctgtgcaccactgacattcggcttcgga
cctgacggctgcaaaccatgtgagtgcgaccgtcgtggctcgatgtcggagttgtgcgat
caggtcagaggtcagtgtgcgtgtcgttcagaagtaacgggccgacgctgtgatcgctgc
cggacgggattctggggtttcccgttctgtcgacaatgtaaatgtaacggactgtcagag
gtgtgtgctgaagagaccggagagtgtctgaactgcagggagcatgccactggaccgaac
tgtgacaggtgtgtagagggttactatggtaaccccatctccagacagccctgtcagccc
tgcctgtgtccagacgttcagagcagtggacgattctttgccacttcctgccaacatgac
ccacaatccttcagtctaacctgtaactgcagggaggggcacacaggtccacgctgcaac
agatgcagccctggtttctatggtgacctggcattgcaaggtgccagctgtgaggagtgt
ccctgcaacaacaacatcgacccagacgaccgcgacgcctgcaacagcctgacgggagaa
tgtctgcactgcctccacaacacgatgggaccacgctgccaagattgcaaacctggttac
tatggcaacgccctagaccaggactgcaaagagtgctcctgtgaccggcgggggacagag
gtgactcagtgtcctctggggagctcctgtttctgtgattcgaggacaggacagtgtccc
tgcaggacgggggtggtgggcgtcctctgtgacgagtgtgaggatggatactggaatctg
gatggagcgtcgggatgtcaaccctgcggctgtgatcctgttaactctttctccaacatc
tgcaacaaggtgacgggacagtgtccgtgtcgtcttgaatttggaggaagacagtgtgac
gaatgtggagaaaatcattttgggaatccagacctgcagtgtatctcttgtgactgtaac
atggagggaaccgagcgcccatcatgtaactctgaaaccggtgagtgtatctgtcggatc
ggcatcaccggtatcttttgtgatgagtgtgcccccggctatgactcggcgttcccagcc
tgcgaagagtgccacccctgcaccaccctctgggccgaaaatgtcaccgatgtccagcaa
gccgctcaaaggatgagaaccttcatccctcgccacaggaacgacctgcggcccacagaa
agtcgccaccggcaacggatgctggaaatgcgctccaagctggacggcctctccaacctg
acaggactctccccgccaaaagtggagaaggtggagaaactgtatgcaatgactgggaag
ctcaaagatgccatcaacccgaacatgattctgatcgacccgtctcctctactcaacact
gaaatcggcaacattcatctagagttcaggaagctggtgaacaacctgaaggagaaactc
accgaggatccaggcgatgaagatgaataccaggaagagctgctggatgatatccagaag
cttcataaagcctttatgttggacgagaagagggtgagaaacgccaacaaagctctggag
gactccatggacaccagacaggaagtcaaaaataaactgggcatgtgcagcagcagagga
gacctggcgccgctggagaagaaggtcaaagagcacagcgcagtcgacctcaaccgaaag
atctgtggaggaccaggtctggaggactgttctggatgtggtggagctttgtgtggtctg
gatctgggaaaaaggaaatgtggaggtccaaactgtaacggagtcattcctgtgagtcag
aaagcttcagagacagcagagagagtgaaggaccaactcatcacagtcccatccagactt
caggagtccaagaacaagatcaatgatgccaaacagacggctcaggacaccaaagaccag
gccaaagacctgcaggaccagatcaatgacaacatggacgcctttgagagagagaagaat
aaaaccaaggatctcatcctgcgagtcaaagactacctgagggatgagatggttccgcca
gaggacatagagaaaatgtcccaagctgttctggacatccaactgccacgatcacctaat
cagatccgttcaatggtcactgacgtcaataatctactgtccaacagcaccaatttccag
gacgacctgaagaacctgaaggagcacgccaagaccacccaggacctgctgcagaaagct
caggaactcaaggagaggaaaaagaagattgatgtgacagagatcaacagagacatttat
gaagcagagaaagctcaggacaaagcgaacgacgacctggaaacagccagcagagacaga
gacatgaccagagaccaagtccaagacattaaagacaaactgaacgacatcgagacaaag
ctgatgaaccgtcgacctgaagatctgaaggacgagatcgaagctctgaagaagaaaact
gaacagaacagagagacagccagagatgctcgagaggctgcagactctactttaaacaac
actactgacacagaaacactggacgatgtgatgaagctgtttgagctcttaaaggagaaa
aacttgaatcgagcagttcaaggtgaagctggagaacgacttaagaacatcacggaggag
gcggagaagatgaagagacaggttaaggacaaactcagacagatacaagatctggagttg
aaaatccagcagctgatcaggagtaaagaggacaaagcagctcaagtctacaacttgctg
gagatggtggattcacttcgacaggaaatctccaaacgagccgaaggatacatcagctgt
acctcataa

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