Siniperca chuatsi (mandarin fish): 122875310
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Entry
122875310 CDS
T08948
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122875310 (lamb4)
04518 Integrin signaling
122875310 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122875310 (lamb4)
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
122875310
NCBI-ProteinID:
XP_044050213
LinkDB
All DBs
Position
LG4:complement(33442228..33500735)
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AA seq
1802 aa
AA seq
DB search
MIFIIFIVFFPGAQLQDLEDLQDQCPGGLCNRQLGDLMVGRADQLSASSTCGLDGPQNYC
IIGYLEEEQKCFTCDSRLPYNRYHNPNSHRIENVITTFDSERKMKWWQSENGVHQVSLRL
DLETVFQFSHLVLTFKSFRPTAMLVERSKDFGRSWKVFRYFAEDCSLHFPSVSNQPANSI
DDVVCDSRYSGSEPSTDGEVVLKALDPIFEIENPYTPNIQDLITLTNIRVNFTRLFTLGD
TLLGRRRRNPQDKYYYALYNMVVRGSCFCNGHASQCTPVDRGRGDVFTQTGMVHGRCVCQ
HNTAGENCERCQDFHHDTPWRPGGENTADICRRCNCHGHSDSCHFDAAHFAVTGGMSGGV
CDDCRHDRTGPQCERCRPFLYQDPQRATEDPHACIPCDCDPVGSQGGGLCDAQSGRCVCK
DNVEGQRCDRCKHGFFNLRQDNPAGCQVCRCHVLGSVRSCDQLTGSCECDHLAIGPLCDR
CLAGFWGLGNSVFRCSPCDCDIGGAHSTTCSPQDGQCHCLPSMVGRRCSDPAPGYFLAPL
DYFLYEAELAAPLHGGSSSSPSSTSPSSSSSSVLNPAVLPKCEQYFREQGYDFKFTNGRV
VLVQRTRRLTRRRRQGQSSIPLDPGHALQIVPRQRSVDQPITWTGLGLVRVLEGAGLRFT
VDNLPSSLDYQLVIRYEPEALSDWLASVNIITVSLGNGSCSSEPTRSKSLILPGKSRGVI
LDSPLCLNAGGRYFVDVIFSKQPGSDGSFSSHILIDSMGLIPRIESVQDFCSQSDLDSFR
RFRCIGLAAELGPQESLPQVCEGLIKSMSARIHNGAVLCRCNVVGSLGPSCSKLGGFCEC
KPNVIGRCCDTCAPLTFGFGPDGCKPCECDRRGSMSELCDQVRGQCACRSEVTGRRCDRC
RTGFWGFPFCRQCKCNGLSEVCAEETGECLNCREHATGPNCDRCVEGYYGNPISRQPCQP
CLCPDVQSSGRFFATSCQHDPQSFSLTCNCREGHTGPRCNRCSPGFYGDLALQGASCEEC
PCNNNIDPDDRDACNSLTGECLHCLHNTMGPRCQDCKPGYYGNALDQDCKECSCDRRGTE
VTQCPLGSSCFCDSRTGQCPCRTGVVGVLCDECEDGYWNLDGASGCQPCGCDPVNSFSNI
CNKVTGQCPCRLEFGGRQCDECGENHFGNPDLQCISCDCNMEGTERPSCNSETGECICRI
GITGIFCDECAPGYDSAFPACEECHPCTTLWAENVTDVQQAAQRMRTFIPRHRNDLRPTE
SRHRQRMLEMRSKLDGLSNLTGLSPPKVEKVEKLYAMTGKLKDAINPNMILIDPSPLLNT
EIGNIHLEFRKLVNNLKEKLTEDPGDEDEYQEELLDDIQKLHKAFMLDEKRVRNANKALE
DSMDTRQEVKNKLGMCSSRGDLAPLEKKVKEHSAVDLNRKICGGPGLEDCSGCGGALCGL
DLGKRKCGGPNCNGVIPVSQKASETAERVKDQLITVPSRLQESKNKINDAKQTAQDTKDQ
AKDLQDQINDNMDAFEREKNKTKDLILRVKDYLRDEMVPPEDIEKMSQAVLDIQLPRSPN
QIRSMVTDVNNLLSNSTNFQDDLKNLKEHAKTTQDLLQKAQELKERKKKIDVTEINRDIY
EAEKAQDKANDDLETASRDRDMTRDQVQDIKDKLNDIETKLMNRRPEDLKDEIEALKKKT
EQNRETARDAREAADSTLNNTTDTETLDDVMKLFELLKEKNLNRAVQGEAGERLKNITEE
AEKMKRQVKDKLRQIQDLELKIQQLIRSKEDKAAQVYNLLEMVDSLRQEISKRAEGYISC
TS
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgatctttatcatcttcattgttttttttccaggagctcaactccaagaccttgaggac
ctccaggaccagtgccccggtggcttgtgtaaccgccagcttggtgacctgatggtggga
cgagcagatcaactgtcagcctcgtccacctgcggtctggatggaccacagaactactgc
atcatcggatacctggaggaggagcagaaatgtttcacatgtgactcacggctgccgtac
aatcgctatcacaaccccaacagccaccgcatcgagaacgtcatcacgaccttcgactcc
gagagaaaaatgaagtggtggcagtctgagaacggagttcatcaggtcagcctcaggctg
gatctggaaaccgtgttccagttcagtcacctggtcctcaccttcaagagtttccgtcca
acggccatgttggtggagcgttcaaaggatttcggacgaagttggaaagttttccgttac
tttgcagaagattgttcgcttcatttcccttcagtgtccaatcaaccggccaacagcatc
gacgacgtggtctgtgacagcagatactccggatcagagccatccactgacggagaggtg
gtgctgaaagctctggatcccatctttgaaatagaaaacccgtacacaccgaacatccaa
gatctgatcaccttgacaaatatccgtgttaacttcactcgtctcttcacgttgggtgac
actttgctgggtcgaagacgcaggaaccctcaggacaaatattactatgctctttacaac
atggtggtccgaggcagctgcttctgtaacggccacgcaagccagtgtacacctgtggac
cgaggacggggggatgtcttcacccagactggcatggttcatggccgatgtgtttgtcag
cacaacacggccggagagaactgtgagagatgtcaggactttcaccacgacaccccctgg
aggcctggaggagaaaacacagccgacatctgcaggagatgtaactgtcacggtcactcg
gactcgtgtcacttcgacgccgctcatttcgcagtgacgggcggcatgagcggtggtgtc
tgtgacgactgccgccatgacaggacggggcctcagtgtgaacgatgtcgaccttttctg
tatcaggatccacagagagctacagaagacccgcacgcctgcataccatgtgactgcgac
ccggttggttctcagggtggcggtctgtgtgacgctcagagcggtcgatgtgtctgtaaa
gataacgtggagggtcaacgctgcgatcgctgcaaacatggcttcttcaacctgagacag
gacaacccggccggctgtcaggtgtgcaggtgtcatgttttgggaagtgtcaggtcatgt
gatcagctgacaggaagttgtgaatgtgaccatttagcgattggaccactgtgtgatcga
tgtctggcaggtttctggggtttgggaaactctgtgttcagatgttcaccctgtgactgt
gatatcggaggagctcacagcaccacgtgttctccacaggacggacagtgtcactgttta
cccagcatggtgggtcgacgctgctctgaccccgcccctgggtacttcctggctccactg
gactacttcttgtacgaggcagagctcgccgctcctcttcatggaggaagctcttcttct
ccttcttctacttctccttcatcttcttcttcttctgtgttgaacccggctgttttacca
aagtgtgagcagtatttcagagagcagggttacgactttaagttcactaacggacgagtt
gttctggttcagaggactcggcgactcacccgccggaggagacagggacagagcagcatc
cctctggacccgggtcacgccttgcagattgttccccgtcagaggtcagttgatcaacca
atcacctggactggcctgggattggtcagagtgttggagggggcggggcttaggttcact
gtggacaacctcccatcatcattggattaccagctggtgattcgctatgagccggaggct
ctgtctgattggctggcttcagtcaacatcatcacagtgtcgctgggcaacggcagctgc
agcagcgagccgacaagaagtaaatctctgattcttccaggaaagtccagaggggttatt
ctggactctccgctgtgtctgaacgcaggcggtaggtacttcgtggacgtcatcttcagc
aaacagcccggatctgacggctccttcagctcacacatcctgatcgactcgatgggtctg
attcccagaatcgagtctgtccaagatttctgctcccagagtgacctcgactcttttcgc
cgctttcgctgcattggattggctgccgagctcggcccgcaggagtcactaccacaagtc
tgtgagggactcattaagagcatgtcggcacgaatccacaacggagccgttctttgcagg
tgtaacgtggtcggctctctcggaccatcctgcagtaaactgggagggttctgtgaatgc
aaacccaatgtgattggccgttgctgtgatacctgtgcaccactgacattcggcttcgga
cctgacggctgcaaaccatgtgagtgcgaccgtcgtggctcgatgtcggagttgtgcgat
caggtcagaggtcagtgtgcgtgtcgttcagaagtaacgggccgacgctgtgatcgctgc
cggacgggattctggggtttcccgttctgtcgacaatgtaaatgtaacggactgtcagag
gtgtgtgctgaagagaccggagagtgtctgaactgcagggagcatgccactggaccgaac
tgtgacaggtgtgtagagggttactatggtaaccccatctccagacagccctgtcagccc
tgcctgtgtccagacgttcagagcagtggacgattctttgccacttcctgccaacatgac
ccacaatccttcagtctaacctgtaactgcagggaggggcacacaggtccacgctgcaac
agatgcagccctggtttctatggtgacctggcattgcaaggtgccagctgtgaggagtgt
ccctgcaacaacaacatcgacccagacgaccgcgacgcctgcaacagcctgacgggagaa
tgtctgcactgcctccacaacacgatgggaccacgctgccaagattgcaaacctggttac
tatggcaacgccctagaccaggactgcaaagagtgctcctgtgaccggcgggggacagag
gtgactcagtgtcctctggggagctcctgtttctgtgattcgaggacaggacagtgtccc
tgcaggacgggggtggtgggcgtcctctgtgacgagtgtgaggatggatactggaatctg
gatggagcgtcgggatgtcaaccctgcggctgtgatcctgttaactctttctccaacatc
tgcaacaaggtgacgggacagtgtccgtgtcgtcttgaatttggaggaagacagtgtgac
gaatgtggagaaaatcattttgggaatccagacctgcagtgtatctcttgtgactgtaac
atggagggaaccgagcgcccatcatgtaactctgaaaccggtgagtgtatctgtcggatc
ggcatcaccggtatcttttgtgatgagtgtgcccccggctatgactcggcgttcccagcc
tgcgaagagtgccacccctgcaccaccctctgggccgaaaatgtcaccgatgtccagcaa
gccgctcaaaggatgagaaccttcatccctcgccacaggaacgacctgcggcccacagaa
agtcgccaccggcaacggatgctggaaatgcgctccaagctggacggcctctccaacctg
acaggactctccccgccaaaagtggagaaggtggagaaactgtatgcaatgactgggaag
ctcaaagatgccatcaacccgaacatgattctgatcgacccgtctcctctactcaacact
gaaatcggcaacattcatctagagttcaggaagctggtgaacaacctgaaggagaaactc
accgaggatccaggcgatgaagatgaataccaggaagagctgctggatgatatccagaag
cttcataaagcctttatgttggacgagaagagggtgagaaacgccaacaaagctctggag
gactccatggacaccagacaggaagtcaaaaataaactgggcatgtgcagcagcagagga
gacctggcgccgctggagaagaaggtcaaagagcacagcgcagtcgacctcaaccgaaag
atctgtggaggaccaggtctggaggactgttctggatgtggtggagctttgtgtggtctg
gatctgggaaaaaggaaatgtggaggtccaaactgtaacggagtcattcctgtgagtcag
aaagcttcagagacagcagagagagtgaaggaccaactcatcacagtcccatccagactt
caggagtccaagaacaagatcaatgatgccaaacagacggctcaggacaccaaagaccag
gccaaagacctgcaggaccagatcaatgacaacatggacgcctttgagagagagaagaat
aaaaccaaggatctcatcctgcgagtcaaagactacctgagggatgagatggttccgcca
gaggacatagagaaaatgtcccaagctgttctggacatccaactgccacgatcacctaat
cagatccgttcaatggtcactgacgtcaataatctactgtccaacagcaccaatttccag
gacgacctgaagaacctgaaggagcacgccaagaccacccaggacctgctgcagaaagct
caggaactcaaggagaggaaaaagaagattgatgtgacagagatcaacagagacatttat
gaagcagagaaagctcaggacaaagcgaacgacgacctggaaacagccagcagagacaga
gacatgaccagagaccaagtccaagacattaaagacaaactgaacgacatcgagacaaag
ctgatgaaccgtcgacctgaagatctgaaggacgagatcgaagctctgaagaagaaaact
gaacagaacagagagacagccagagatgctcgagaggctgcagactctactttaaacaac
actactgacacagaaacactggacgatgtgatgaagctgtttgagctcttaaaggagaaa
aacttgaatcgagcagttcaaggtgaagctggagaacgacttaagaacatcacggaggag
gcggagaagatgaagagacaggttaaggacaaactcagacagatacaagatctggagttg
aaaatccagcagctgatcaggagtaaagaggacaaagcagctcaagtctacaacttgctg
gagatggtggattcacttcgacaggaaatctccaaacgagccgaaggatacatcagctgt
acctcataa
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integrated database retrieval system