Siniperca chuatsi (mandarin fish): 122875336
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Entry
122875336 CDS
T08948
Symbol
sv2
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122875336 (sv2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122875336 (sv2)
Transporters [BR:
schu02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
122875336 (sv2)
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
OATP
Motif
Other DBs
NCBI-GeneID:
122875336
NCBI-ProteinID:
XP_044050251
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Position
LG4:complement(4468860..4481168)
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AA seq
568 aa
AA seq
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MSRHVHAGDAEAREPLLSGDYLEPHELDSDEGVGLLVGQNKTYGVAVSLDSRNCEVIFDR
GASNIRRDAGGSAQRRLTYEEAVEEAGFGLFHWLLLVVCGWANASDAVEIFCVSFLLPTA
RCDLLLSSSDMGLLTASIFLGMMVGGYMWGYLADRRGRRRVLVVSLTVNGLFGGLASVAP
WFWLFLLLRFISGIGVGGSIPVIFSYFSEFMPRWRRGAMISALATFWMAGNILAAGLAWL
VIPRTWVHFSLGSLDFQSWRLFVVLCSVPSLTSALLFRLLLPESPKFLMEAAREKEAIHV
FQVMFELNMWGKGKDFPEFGLCTSPKQREEPEETRTLGSRKERLACILKKGLVPIKQMFN
GPLKSRSIVLLIIFYSISFGYYGLWMWFPELFERIENGGSPCANVSLPSPLHNQSCYPVK
TAVYMEGFIIAASNLPGNIFTILMIDSTGGKALLSFSLLVSSLSVFLIYVVQTKAQSVAL
SCVFSGVSVIAWNALDVLGTELYPTHLRSSALGFFTGVGRVAAIMGNIAFGKLVDTNCAV
PVLLVSALLLTGGLVALLLPQTRQTELT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcacgtgcatgccggagacgcggaggcgcgtgagccgcttctcagcggtgac
tacctggagccacacgagctggactcagatgaaggtgtggggctgttggttggacaaaac
aagacatatggagttgccgtttccttggactcaagaaattgtgaagtcattttcgacagg
ggcgcatcaaacatcagacgtgatgctggtgggagtgcgcagagaagattgacgtatgag
gaagcagtagaggaagcaggttttggtttgttccactggctgctgttggtggtgtgtggt
tgggccaatgccagcgacgctgtggagattttctgtgtgtcttttctcctgccaacggcg
cgctgcgatctgctgctgagctcttcagacatgggcctgctgactgccagcattttcctc
ggaatgatggtgggcggctacatgtggggatacttggctgaccggagggggcgtcgcagg
gtcttggtcgtgtccctgacagtcaacgggctgtttggaggtctggccagcgtggctccg
tggttctggctcttcctgctgctgcggttcatcagtggcatcggggtcggtgggtcgatc
cctgttatcttctcctacttctcagagtttatgcctcgttggaggagaggtgcaatgatc
agcgctctggccaccttctggatggcaggaaacatcctggctgcaggtcttgcctggttg
gtgattccaagaacctgggtacacttttctctgggatcactggacttccagagctggaga
ctgtttgtggtgctctgctctgttcccagcctcacttcggccctcctcttcaggctgctc
ttgcctgaaagccccaagttcctcatggaggctgcccgggagaaggaggcgatccacgtc
ttccaagtgatgtttgagctgaacatgtggggaaaaggaaaggatttcccggaatttggt
ttgtgtaccagccccaagcaaagagaggaaccggaggagaccagaactctgggttcacgt
aaagagagacttgcttgtattttgaaaaagggcttggttcccattaaacagatgtttaat
ggtcctctcaaatccaggagcatcgttctgctcatcatcttctacagcatctccttcggt
tactacgggctgtggatgtggttcccggagctgtttgagagaattgagaacggcggctcg
ccgtgtgccaacgtgtccctcccgtctccactccacaaccaaagctgctacccggtcaaa
acagcagtgtatatggagggcttcatcattgctgcatcaaacttaccgggaaacatcttc
accattcttatgatagacagcacaggaggaaaggctttactgtccttcagtctgctggtg
tccagtctgagcgtcttcctcatctatgtggtccagaccaaagcccagagtgtggccctc
tcctgtgtcttcagcggcgtgtcagtgatagcctggaacgccctggatgtgttggggaca
gagctctatcccacccacctacggtcatctgctctcggtttcttcacaggagtgggccga
gtggcagcgatcatgggtaacatagcctttggaaagttggtggacacaaactgtgccgta
ccggtcctgctggtgtcggctctgctgctgactggaggactggtggctcttctgcttcca
caaaccaggcagactgagctcacctga
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