Siniperca chuatsi (mandarin fish): 122875374
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Entry
122875374 CDS
T08948
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122875374 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122875374 (myo5c)
04131 Membrane trafficking [BR:
schu04131
]
122875374 (myo5c)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122875374 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122875374 (myo5c)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122875374 (myo5c)
mRNA cycle factors
P-body specific factors
122875374 (myo5c)
Membrane trafficking [BR:
schu04131
]
Others
Actin-binding proteins
Myosins
122875374 (myo5c)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122875374 (myo5c)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122875374 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
122875374
NCBI-ProteinID:
XP_044050301
LinkDB
All DBs
Position
LG4:9875825..9886535
Genome browser
AA seq
1742 aa
AA seq
DB search
MALLELYTGYNRVWIPDAEHVWKSAEIMRDFHFGDNVLELLLEDGTEHCYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLSIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIISGESGAGKTVSARFAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAHLPEFKNLRLLSADKFRYTCMSGEITIDGVD
DKKAMEETRQTFSVLGLKEDFQSDVFKVLAAILHLGNVEIRNSGGDKSSVPPSDPHLVVL
CELLGLSAEGLVRWLCHRRIVLAAETLVKPMPKERAVNARDALAKQMYAHLFDCIINRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVDIMRVSKFPFLANFFQEEERSTVN
SRGVKVRPARPAVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEWDLKDKKQTCKDV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKYLRIR
EAAIILQEYIRGKRTIRKTVSAAALKMGWGTMVIQRHWRGYRMRQIYQVVRLASITIQAF
TRGWMAREQYKKMIEEQKAVVLQKYARAWLARRRFQTMRRLVLNVQLSYRVQQLRKKIEE
QNRENHGLMERLTSLANSNSQTMDRLQSLEAQLEKSTNQKASLEAREKKANEDASLTIAQ
LQKETDALNLEKQNLEKKFEASTKEAKESFDQIKRNLLEEKEYEARLRKIAENNIEIQRQ
DHEKEVETLKEEIKRLKEERVSLQRKIEEGGQVNSDLQEQVIQLTKHVKAIPELRRDLNN
LQNQRNDMDRRMKQQSEQAKAKMNDITRQLLGGVVEEEVILGLTTDHSEKIYEVEDLLEA
FDGLQKATRILENHQREQKENYETQVEGLKLKMDHLQNENSKLQNLFQEKSNVNENIRQE
VSRLSSENSVIPELKLQISELQRQKQELEAHAEEQNRELADKTEEITNVLQRKIKEESSQ
RRHFEEKAEELEELKRELQDRVEELEEENDHLKRQRLMESEAKSKQRQETSRLTAENMDL
EEQLDQKDRLIKKLQNQIKSLETSQKAKQTSVSAVPKDYLGMLEYKREDESRLIQNIILD
LKPKGVVVNMIPGLPAHILFMCVRHADYLNDEVKLKSLMNATIGAVKKVIMSHHKDFELL
SFWLSNTYQLLNCLKQYSGEEEFMKQNTPRQKKNCLKNFDLSEHRQILSDVAIHIYHQFI
TVMEKAVAPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETYTISSIIQQLSVFHS
TMSQHGMEQGLIKQAVKQLFFLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAMDTLRPLSQAAWLLQVNKSTDDDAKEIAEQCTELNPVQIVKILNSYTPIDDFE
KRVTSSFVRKVQSLLQDREGSTQLMLDSDYRFQVMFPFCPSSQALELLQVPSSLHLGFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactgtacaccgggtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcagccgagattatgagagactttcattttggggataatgttcttgagttg
cttcttgaagatggcactgagcactgctaccctgttgacccgtcaaaaccacaactccct
cctcttcgcaaccctgacatcttggtgggggagaacgacctcaccgctctcagctacctg
cacgaacctgcagtcctgcataaccttaaagtgcgattcgtggagtccagaatcatctat
acctactgtggtattatactggtggctgtaaatccatacaaacaactttctatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtctatcatc
atcagtggtgagtctggagccggtaaaactgtgtctgctcgattcgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgagttgaagacaaagtcctggcatccaat
ccaataacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgtttt
gggaaatacaccgagatcagctttgaccggaggtaccggatcatcggagcaaacatgagg
acctatctcttagagaaatccagagtcgtttttcaggcagacaacgagcgaaactatcac
atattctaccagatgtgttcgtgtgctcacctgccagagttcaagaatctaagactgttg
agtgcagataagttccggtacacctgcatgagcggtgagatcactattgacggtgtagat
gacaagaaagccatggaagagactcgacagaccttctcagtgctgggattgaaggaggac
tttcagtcagatgtgttcaaagttttggcagccattctgcatttgggaaatgtggaaatc
agaaactctggaggggacaaatcatcagttcctcccagtgatccacacctggtagtctta
tgtgagttgctgggtctgagcgcagaggggttggtgcgttggttgtgccatcggaggatc
gttttggcggctgagacgttggtgaagccgatgcccaaggagcgggcagtaaatgccaga
gatgcacttgccaagcagatgtatgcccatctgtttgactgtattattaacaggataaac
acagcactgcaggttccaggaaagcaacacgctttcataggtgttctggacatttatggc
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactatgcaaatgaaaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccatggacgttgatagatttctatgacaatcagccggtcattgacctgattgaa
gcaaagatggggatccttgacttgcttgatgaagaatgtttgtttcctcagggcactgat
caaagctggctgcaaaagctgttcaactacctagatgccaatcctctgtttgagaagccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggtggaatatcaatgc
agaggttttcttgaaaagaacagagacgctctctatgaagaactggttgacattatgaga
gtcagtaagtttccttttctggccaactttttccaagaggaggagcgaagcactgtgaac
agtagaggtgtcaaagtgaggcctgccagacctgcagtgaaaccagccaataaacagctg
agaacttctgtgggagataagttctgcagctccctctctttactgatggaaacactgaat
gctaccacccctcactatgtgcgctgcattaagcccaacgatgaaaagctcccatttgaa
tatgactccaggagggtggtgcagcagctgcgagcctgtggagtccttgaaacgattcgt
atcagtgcacagagctatccgtccaggtggacatacattgagttttacagccgatacagt
atcctaatgtcacatcaggagtgggacctcaaggacaagaagcagacctgcaaggacgtg
ctgcagaggctgattcaggaccccaaccagtacaagtttggtcggacaaagatcttcttc
cgagctggtcaggtagcttatctcgagaagctgcgcctggaccgactgagaggagcctgc
gtgaccatccagaaacacgtccgcgggtggagccagaggaggaagtacctgcgcattaga
gaggcagccatcatcctccaagagtacatccgtggaaagaggacaatccgtaaaacagtg
agtgctgcagcactgaagatgggctggggaacaatggtgatccagagacactggagaggt
taccgcatgagacagatctaccaggttgtccgtctggcctccatcaccatccaggccttc
acacgaggttggatggcccgtgaacagtacaagaagatgatagaggagcagaaagctgtg
gttttacagaagtatgctagagcatggctggcacggcggcgttttcaaaccatgcgtagg
ctggtgcttaacgttcagctctcctacagggtgcagcagctcagaaagaagatagaagag
cagaacagagagaaccacggcttgatggaaagactgacaagcttggccaactccaattct
caaaccatggacaggcttcagagtctggaggcacagctggaaaaatcaaccaaccagaag
gcgtctttggaggcaagagagaagaaagcgaatgaagatgctagtctgacaattgcgcag
cttcaaaaggaaacagatgcactaaaccttgaaaagcagaacttggagaaaaagtttgaa
gcttccaccaaagaggccaaagagagctttgatcaaataaagaggaatcttctggaagag
aaagaatatgaagcaagacttaggaaaattgcagagaacaacattgagatccagagacag
gaccatgagaaggaggtggaaactctgaaagaggagataaagagattaaaagaagagaga
gtcagtctgcagagaaagatagaggaggggggccaggtgaactctgacctgcaggaacag
gtcatccagctcaccaaacatgttaaagccattcccgagctacgcagagatctcaacaac
ctgcaaaatcagagaaatgacatggaccgaaggatgaagcaacagtcggaacaagcaaaa
gctaagatgaatgatattacgagacaacttcttggtggtgttgttgaagaggaggttatt
ttggggctcactaccgaccactctgagaagatttatgaagttgaagatttgctggaagcc
tttgatggcctacagaaagctaccagaatactggaaaaccaccagagggagcagaaggaa
aactatgagacacaagtggagggcttgaaattgaaaatggaccaccttcaaaatgagaac
agcaagttgcaaaacctgttccaggagaaaagtaatgtcaatgagaatattcgtcaagaa
gtgtccaggctcagcagtgaaaactcagttataccggagctgaaactgcagatttcagag
ctgcaaagacaaaagcaagaattggaggctcatgcagaggagcagaacagagaactagca
gacaaaactgaggaaatcactaatgttcttcaaaggaaaatcaaagaagagagctcacaa
cgcaggcactttgaggagaaagccgaagaactggaggagttgaagagggagctccaagac
cgagtagaggagctggaagaggagaatgatcacttgaagagacagcggttgatggagagc
gaggccaagagcaaacagagacaggagacttcacggttaactgctgagaatatggactta
gaagagcagctcgaccagaaagacagattaataaagaaactccagaatcaaataaagagc
cttgaaacatcacagaaagcgaagcaaacgtctgtgtctgctgttcccaaagattacctt
ggcatgttggagtacaagagagaggatgaatccaggctcattcaaaacatcattctggat
ctgaagcccaaaggtgtggtggtcaatatgatccccggtttgccagctcacatcctcttc
atgtgcgtccgccatgccgactacctcaatgatgaagtcaaactcaagtctcttatgaat
gcgaccattggtgctgtcaaaaaggtcatcatgagtcaccacaaagactttgagttgctg
tcattctggctgtcaaacacgtatcagctgctcaactgtctgaagcagtacagcggggag
gaggagttcatgaagcaaaatactcctcgccagaaaaagaactgcttgaagaattttgat
ttgtcagaacacagacagattctcagcgatgtggccatccacatctaccatcagtttatc
acagtcatggaaaaggccgtcgctcctgcaatcgttcccggtatgttggagcacgaaagt
ttacaggggatttctagcatgaagccgacgggcttcaggaagcgctcgaacagcatctac
gaggactcggagacgtacaccatctcctccatcattcagcagctcagtgtcttccactcc
accatgagccagcatggcatggagcagggcctcatcaaacaggctgtcaagcaactgttc
ttcctagttggtgcgactaccctcaacaacatcatgctccgcaaagatatgtgttcctgc
aggaaaggaatgcaaatcaggtgcaacatcagttacctggaggaatggctgaaggagaag
gaactgcaaagctctaatgctatggacactttgaggccgttgtctcaggccgcctggtta
ctgcaagtcaacaagtctactgatgacgacgccaaggagatcgctgaacaatgcactgag
ctcaaccccgttcagattgtcaagattttgaactcctacacacccattgatgattttgag
aaaagggtgacgtcgtcatttgtccgcaaagttcagtcattgctacaagatcgtgaaggg
tccacacagctgatgctggactcagactatcgtttccaggtcatgtttcctttctgcccg
tcctcgcaggctctggagctgctgcaggtcccgagcagccttcatctgggtttcctaacc
aggatctga
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integrated database retrieval system
