Siniperca chuatsi (mandarin fish): 122875393
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Entry
122875393 CDS
T08948
Symbol
clpxb
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
schu03110
]
122875393 (clpxb)
Chaperones and folding catalysts [BR:
schu03110
]
Heat shock proteins
HSP100
122875393 (clpxb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
Sigma54_activat
AAA_7
AAA_22
AAA_14
IstB_IS21
NACHT
AAA_16
nSTAND3
RuvB_N
Sigma54_activ_2
DEAD
ABC_tran
TsaE
ResIII
AAA_18
AAA_25
AAA_28
T2SSE
PduV-EutP
AAA_23
DUF5795
Motif
Other DBs
NCBI-GeneID:
122875393
NCBI-ProteinID:
XP_044050364
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Position
LG4:9920666..9932318
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AA seq
624 aa
AA seq
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MSCPCTSAARLFINTAHRGLSCSRIQFFSLRRQGSRETHLPPWVRVRSFSETAVCYASKD
GTTKDSGSDGGKKSISEAKRQSGSGGSGKGGSQLRCPKCGDPCTHVETFVSSTRFVKCEK
CHHFFVVLSETDSKKGINKEPESAAEAVKLAFAQKPPPPPKKIYAYLDKFVVGQSYAKKV
LAVAVYNHYKRIYNNIPAGSRQQVEVEKQPSLTPRELEMRRREDEYRFTKLLQIAGISPH
GNALGASMQQQASQQAPQERRGGEVLDSTHTDIKLEKSNIILLGPTGSGKTLLAQTLARC
LDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYSVEKAQQGIVFLDEVDKIGSVPGI
HQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRI
ISRRKNEKYLGFGTPSNMGKGRRAAAAADLANTSGETDTVAEIEEKDRLLKHVEARDLIE
FGMIPEFVGRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCELSVNQDALRA
IARLALERKTGARGLRSIMEKLLLEPMFEVPHSDIMAVELDKDVVQGKSQPKYIRAPAKE
SAEEEYDSGIEEENWPRQADAANN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtccatgcacctcggctgccaggttgttcataaacactgcccacagaggattg
tcctgctcccggatccagtttttttctctgagacgtcaggggtctcgggaaactcattta
cctccctgggtacgggtgaggtcgttttcagagactgctgtctgctatgcctctaaagat
gggacaacaaaggacagtggaagtgatggtggaaagaaaagcatcagtgaggcgaagaga
cagtctggctctggaggatcaggcaaggggggaagccagctacgctgccctaaatgtgga
gatccctgcacacatgtagagacctttgtatcatcaacacgatttgtcaaatgtgagaaa
tgccatcactttttcgtggtcctttctgaaacggactctaagaaggggattaacaaagag
ccagaatctgctgcggaggcagtgaaactggcatttgcacagaaacctcctcctccccct
aagaagatatatgcttacctcgacaagtttgttgttggccagtcctatgcaaaaaaggtg
ttagctgtcgcagtgtacaatcactacaagcgcatctacaacaacatccctgctgggagt
cgacagcaggtggaggtggaaaaacagccctctctaacacctcgtgagctagagatgaga
agacgagaggatgagtacagattcacaaaactgctgcagattgcagggatcagtcctcat
ggaaatgctctgggagcgtccatgcagcaacaggcgagtcagcaggcacctcaggagagg
aggggtggggaggtcctggactccacacacactgacattaaactggagaagagcaacatc
atacttctaggaccaaccggctcaggaaaaacattgttggcgcagacactggcacgttgt
ctggacgttccctttgcaatttgcgattgcaccacactaactcaagctggatacgtggga
gaagacatcgagtcagttattgccaaactgctgcaagatgccaactactcagtggagaaa
gcacagcaaggcattgtgtttctggacgaggttgataagattggcagtgtgcctggaatc
catcagctgagagatgtaggaggagagggagtccagcaggggttgcttaaactcttggag
ggcacaatcgtcaatgttcctgagaaaaactccaggaaactgagaggagaaacggtgcag
gtcgatacaacaaacatactgtttgttgcatctggtgcattcaacggacttgacagaatc
attagcagaagaaagaatgaaaagtatttgggttttggaactccctccaacatggggaaa
ggccgccgtgcagcggcggccgcagacttggccaacactagcggtgagacggacacagtg
gcagagatagaggagaaggacaggctgctgaagcacgtcgaggccagggacctgattgag
tttggaatgatcccagagtttgttggccgtcttcctgtggtcgttcctctgcacagcctg
gatgaagaaacactagtccgaatcttgactgaaccacgtaacgcagtggttccccaatac
caggctctgttcagcatggacaaatgtgaactcagtgtgaatcaagatgccttgagggcc
atagccaggctggctctggagagaaaaactggagctcgtgggctcagatccatcatggaa
aagctccttctagagcccatgtttgaggtgccgcactctgacatcatggctgttgagcta
gacaaagatgttgtccaaggaaaatcacaacccaaatacatcagagctccagccaaggag
tctgcagaggaggaatacgactcgggcattgaggaggagaactggcctcggcaggcagac
gctgctaacaactga
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