Siniperca chuatsi (mandarin fish): 122875397
Help
Entry
122875397 CDS
T08948
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
schu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122875397 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
122875397 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122875397 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122875397 (gtf2h1)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122875397 (gtf2h1)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122875397 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
122875397
NCBI-ProteinID:
XP_044050376
LinkDB
All DBs
Position
LG4:10250530..10258820
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
SKIQLQLVLHTGESTTFHFSNDSSALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWTNRLGDINNTDPALYNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRISTGTQ
DIFSECAKQDEKGLKSMVVQGVKNPLVDLLSLEDKTLDEGYGVCTTTPSTSNSNRTVKES
SNAAIIKRFNHHSAMVLAAGSRKGETPTDQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYEDLQRENRPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIRHEMVNYKPNL
TQVLSSTTASSAIAALSPGGVLMLAGAQQAINQMVPTEVQGELKHLYAAAGELLRHFWSC
FPVNTPFLEEKVMKMKTNLERFQVTKLCPFQEKIQRQYLSTNLTGHLEEMLQTAYSKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactatcagaggaggtgctgctggtggtgaaaaaggttcgccagaggaagcag
gatggcacactttatctgatggctgaacgtatagcctggggtccagagggcaaagaccgc
ttcacagtcagccacttgtatgcagatattcgctgtcagaagatcagcccagatggtaaa
tccaaaattcagctccagctggtccttcacaccggcgaaagtaccacattccacttttcc
aatgacagcagtgcactcaaagacagggacgctgccaaggaactgctgcagcagctactg
cccaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatccggtgcttttccagttatataaggatctcgtggtgagccaagtgatcagtgctgac
gaattctggaccaacaggttaggagacataaacaacacagaccccgcactatacaacaac
aaacaggaagtcggtatatctggagcctttctggcagacattagacctcagacagatggc
tgcaacggcttgagatataatctgacagctgacattattgaatccatcttcagaacatac
cctgcagtgaagcagaagtatagtgaaaatgtgcctcataacctgacggagaaggagttc
tggacccgctttttccagtcccattattttcacagagaccgcatcagcacaggaacacag
gatatcttctcagagtgcgccaagcaggatgaaaaggggttaaagtctatggtggttcaa
ggagtgaagaatcctttggtcgacctcctgtcgttagaggataagacattagatgagggt
tacggagtttgcacaacgacaccctcaacttccaattcaaacaggacggtgaaggagagc
agcaacgctgccattataaagcggttcaaccatcacagtgccatggtgctggcagcgggc
tcacgcaagggggaaacaccaactgaccaagctagtgagacgagcagtacagatggaaac
tcaagggattctgacttcttccagcctcctgtaaaaaaggttaaattacaagaagccatt
gaatatgaagatctgcaaagggaaaacagaccaaaaacagtcgcattaaacctcaagaag
tctgacaggtatgctcacggtcctgtgccacttcagtcccaacagtatacgacaagccag
gatatcatcaactctgtcaactacatccggcatgagatggtcaattacaaacccaacctc
actcaggtgttgtccagcacaacagctagttctgccattgcagcactttctccaggaggc
gtcctcatgctggcaggagcgcagcaagccataaatcagatggtacctactgaggttcaa
ggagagttgaagcatctttatgcagctgctggagagttgttaagacacttctggtcctgt
tttcctgtaaacacaccgtttttggaggagaaggtgatgaaaatgaagacaaaccttgag
agatttcaggtgaccaagctttgtccttttcaggagaagattcagcgtcagtacttaagt
acaaatctcacagggcatctggaggagatgttgcagacagcctatagcaagttccacatc
tggcaaacccgtcgcatgatgagaaaaacctga
DBGET
integrated database retrieval system
