Siniperca chuatsi (mandarin fish): 122875466
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Entry
122875466 CDS
T08948
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3 isoform X1
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122875466 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122875466 (taf3)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122875466 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
DUF4776
RNA_pol_Rpc4
PHD_2
PHD_5
Motif
Other DBs
NCBI-GeneID:
122875466
NCBI-ProteinID:
XP_044050557
LinkDB
All DBs
Position
LG4:8195549..8204002
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AA seq
936 aa
AA seq
DB search
MCESYARSLLRVSVAQICQALGWDAVQLTACDLLSDVLHRYIQQLARACHRYSELYGRTD
PVLDDVSQAFRLLGVSLSELEDYVHNLEPVAFTHQTPLFPVSKNNVLQFPQPGARDAEER
KDYIPDYMPPLVSLQEEEEEEEVLADMGTSAEAMQVALEEDEEEMDEDETVNDENHPLKR
HLDSPDAAMGMMPTSKRPRMYPGLSPEWGTEPREPLTSLNPQRVPPGMLPTHDSLDPLSP
ETPSGALPSFRPQPVVPKHSDQKGLTTPGRKPRVSSPGRQRTKSPKGVIPVPVGGSPIQS
PKPSKERKKSPGRTKSPKSPKSPKMVSAKTSQPQSKTDGVHKLPLSALSERMGKENIHMR
LNIEDRELAEGPFKKLEPDNTAIDDSIDAVIARACAEREPDPFAFSSGSDSDSNGFSSPR
RLTIMEPSTPKVLIGANNTVKDTSTPLHPHTHAGLGNWTMDDSINEVIRKVNQGGPSAPP
PNQGEYVSSGSASPPTPEPLLKVFEEKNKIVSSVDVKKKLKKELKTKMKKKEKDKPKDKD
REKDKSKLKEKNKEKNRDKNKEFSKDSKMPWKEFGMKDDELFVQRDFTLPEGSLKIKTRD
GDGPKKEKEKHKDKKKDKEKSKKDKDKRDKGKDRSKDDRQKQSALAPFALSEVPPLFSPS
ACLRIPSMLPPLAPILQDKDIKSKEKDKKKDKKEKKKKKDKEKDKEREKAKEKEREKEEK
RKEKEREKEKREKEKEKERIRLEKVKVDTPAALPSPVIPRLTLRVGAGQDKIVISKVVPN
SEPKTPAPKTPAAKSGPGNRPRTPPPPPILSPVAPTMLPPASPLPPAPAPSSLLSPAPML
SPPAASFKTPVRSVVTETVSTYVILDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWP
CVGILTAPPEDQQWFCVKCSSKKKDKKHKKRKHKLH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctatgcccgctcgctgctgcgtgtttcggtggcgcagatctgccaggct
ctgggctgggatgcggttcagctcactgcgtgcgatctgctgtccgatgtgctgcatcga
tatatccagcagttggccagggcctgccatcggtactctgagctctatggaagaacagat
ccagtcctggacgatgtcagccaggccttcaggctgctgggggtgagtctgagtgaactg
gaggactacgtccacaacctggagcctgtggccttcacccatcaaacaccgctctttcct
gttagcaaaaacaatgtcctgcagtttccccaacctggagcccgagatgcagaggaaagg
aaggattatattccagattacatgccacccctggtctccttacaagaagaagaggaggag
gaggaggtccttgctgacatgggcacctcagccgaggctatgcaggtggcactggaagag
gatgaggaggaaatggacgaagacgagacggtcaacgatgagaaccacccactgaagagg
cacctggacagtcctgatgcagctatgggcatgatgcctacctccaagaggccgcgcatg
taccctggcctcagcccagaatggggcactgagccaagggagccccttacctctctcaac
cctcaacgtgttcccccaggcatgctgcctactcatgatagccttgaccccctgtcacct
gaaacaccttctggagccctgccttccttcagacctcagccggtagtaccaaaacactca
gatcaaaagggcctcaccactccaggaagaaagcctagggtctcatcccctgggagacaa
cggactaagtcccctaaaggggtcattcctgttccagtgggtggtagtcccattcaatct
ccaaaaccatctaaggaaagaaagaaatccccagggaggactaagagtcctaaaagcccc
aagagcccaaagatggtttcagctaaaacatcccaaccccagagcaagacagatggtgtg
cataagctaccgctgtctgcgctgagtgagaggatgggcaaagaaaacatccatatgcgt
ctgaatatagaggacagggagttagctgagggccccttcaagaaactggagcctgataat
acagccatcgatgactccattgatgctgtgattgccagagcgtgtgctgaacgggagcct
gatccttttgctttttcctcgggctctgattcagatagcaacggattctccagccccagg
aggctgaccatcatggaaccgtctacgcctaaagtcctgataggagccaacaacactgta
aaagacacttcaacaccacttcacccacacacacacgcaggcctaggaaactggactatg
gatgattcaatcaatgaggtgatccgaaaggtcaaccagggtggtccatcggcacccccg
cctaaccaaggagaatatgtgtcctcgggatcagcctcaccacctactcctgaacctctg
ctcaaggtgtttgaggagaagaacaagattgtgtcatcagtagatgtcaagaaaaagcta
aagaaggagctcaaaactaaaatgaagaagaaggagaaagacaagccgaaagacaaagac
cgggaaaaggataagagcaagctgaaagagaagaacaaggagaagaacagggataaaaac
aaggagttttccaaggacagcaagatgccctggaaggagttcggaatgaaggatgatgag
ctctttgttcagcgagactttactctgcctgagggctccctcaagataaaaaccagagat
ggagatggccctaagaaggagaaagagaaacacaaagacaaaaagaaggataaagaaaaa
agtaaaaaggacaaagataagagggacaagggtaaagaccgaagcaaggacgacaggcag
aaacaatctgcgttagccccctttgctctgagtgaagtcccaccactgttcagcccctct
gcctgcctgcgcataccctccatgcttcctcctttggccccgatcctccaggataaggac
ataaagagcaaggagaaggacaagaagaaagacaagaaggagaagaagaagaagaaagac
aaggagaaggataaggagcgagagaaggccaaagaaaaggagagggagaaagaagagaag
aggaaagaaaaggagagggaaaaggaaaaacgagaaaaagagaaagaaaaagagagaatt
cgattggagaaggtgaaagtggacactccagcagctttaccgtctccagtcatccccaga
ctgacactcagggtgggagcaggccaggacaaaattgttatcagcaaggtggttccaaat
tcagagcccaagacgccagcacccaagacccccgctgccaagtctggacctgggaatcgc
cctcggacgcccccgcctcctccaatactctccccagttgcacctactatgcttccacct
gcctctccactcccgccagctccggccccttcgtcactgctctcccctgcccctatgctc
tctccccccgccgcgtccttcaaaacaccggtccgcagcgtagtaactgagactgtcagt
acctacgtgatcctagatgaatggggaaatcagatctggatttgtcctggatgcaacaaa
cctgatgatggcagtcccatgataggatgtgatgactgtgatgattggtatcattggcct
tgtgttgggatccttacagcccctcccgaggaccagcagtggttctgtgttaaatgttcc
agcaagaagaaggacaaaaaacacaagaaaaggaaacacaaactgcattga
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