Siniperca chuatsi (mandarin fish): 122875553
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Entry
122875553 CDS
T08948
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
schu
Siniperca chuatsi (mandarin fish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
Motif
Other DBs
NCBI-GeneID:
122875553
NCBI-ProteinID:
XP_044050776
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All DBs
Position
LG4:complement(14793463..14952513)
Genome browser
AA seq
2004 aa
AA seq
DB search
MPLRPAAGKHEPPSPPRQDQQQQQHTHTHSYTLTHPYTHAANGSQGASTDSGSSREEDSG
VPIPVGVPAFCPSAEWSHSARAPMEEPTGNTVVIRIGIPDLQQTKCMKFNVDAPIWLSKQ
RILCTLNQSLKDVLNYGLFQPAYNGKAGKFLDEERQLREYPFPSIAPVPYLEFRYKRRVY
TQTHLDEKQLSKLHTKGCPSSLERTVVADPHSDIQANLKKFMEYVQQRNIEKVSRFLEKG
LDPNFHDPDTGECPLTLAAQLEGCAELIKVLKSGGAHLDFRTKDGITALHKAVRSKNHTA
LITLLDLGASPDYKDSRGLTPLYHSSMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQAC
RYGHVQHLEHLLFYGADMSAQNASGNTALHVCALYNQDSCARVLLFRGGNKEIKNYNSQT
AFQVAIIAGNFDLAEIIKVHKVSDVVPFRETPSYTNRRRAIPGPLPSPRSLLRSASDNNL
NGDHDHIHGQAPREMRGRQGHSSVPSLRSLPALGQQHSSFGESRHGEIPDSSLQSTGSSR
SSHSRSPSLHHMHEEDKPVPRRSHSHGYPHGYSHRGRLSPGSVQRDPSPPHHTPAALTGP
RGPKRKLYSAVPGRTFIVVKPYTPQGEGEIQLNRGERVKDYDCNDVEVLSIGEGGFWEGT
VKGRTGWFPADYVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNFTSYSDYVIEEKNA
VLQKKENEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIE
VNGVNVVKVGHKQVVSLIRQGGNRLLMKVVSVTRKPESEEVVRKKAPPPPKRAPSTTLTL
RSKSMTAELEELASARRRRGERLDEMLASQESMLRSQPSETDYRAATVKQRPTSRRITPA
EISSLFERQGMTLHGGLHPGIERGHIPLPKGMSRTKSFGATEEDRLSALAGEHRFPRSSS
MTDSLRDHSQPHPIPPPPQMAPPPPPYYLDTGPPPAFCPPPPPSRTQSQGHEPGGRSSFK
PSSLDLPYEATQRQATHIERQKKARSMIILQDSSHLPVEPTEIPRPSAATPPERIKRKGR
VIDNPYANVGQFSIGLYTPTKPQRKKSPLVKQLQVEDAQEKASLALAAAHSRESSPSGRH
PHTHGHTHTSRADYYQQQLMAERERMRAQGEMMFQGKGPFAAAIAGAVKDRERRLEERRK
STVFLSVGTMEGASTTSSDAPSLTQSHSIDERMLTRELGQLPPPALALSPSPSGTTFIHP
LTGKPLDPNSPLALALAARERALTSQSPASSPEPRTKQERAGQGIIFIDPQTKESPHGEG
AHTSPPFSPNSAKAAGYGVPPASILVPQPTKLQWATSPSPVSFRQEMEARVEERKEEKRL
EDKKSMLISIMDTSQQKTAGLIMVHATSNGQAVGVGSELEQTPAPTSMEPSKSPSPRAKS
PSPTVSQSQAQLQAQPQTPRPASPAQEKSLAQGSSEEDVDPYTVTLPPAMLSSSDEETRE
ELRKIGVVPPPDEFANGLLAQAQGMPVSPAKPASSATTPTTPTPQTPSTPTTPTMTPTQP
QPPQPPPPPSAVAVSGKPSDPLEPPPVGESGSAADSGVEEADTRSSSERERDHHLETTST
VSTVSSMSTLSSESGEPADTHTTHTSYADGQTFVLDKPPVPPKPRLKSQIGGSKGPVTFR
DPLLKQSSDSELLSQQQAAALAAAAAGGAGLPSGGSASVTGLAPTKPRYLFQRRSKLWGD
PVEPRGPGVGLGIGSLGNLGGLGLGLGADEGAKPSVMGELSSRLQQLNKDTRSLGEEPMG
ASLDPGRKSPVAGARLFSSLGELHTISQRSYGTTYTIRPGSRYPVTRRTTSPGSGSPDRG
DPLGRFSSYGLPTSPTTPPQTILKSSSLSLPQEPKEVRFVMRSSSARSRSRSPSPSPSHS
PGLGSPLLALRPFHQKPLHLWNKYDVGDWLESINLGEHRAGFQEHEIEGSHLPALTKDDF
AELGVTRVGHRMNIERALKLLLES
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccgcccagccctccacggcaggaccag
cagcagcagcagcacacacacacacactcatacacactcacacacccttacacacacgca
gcaaacggcagccagggggccagcactgacagcggcagctcccgggaagaggacagcggc
gttcccattcctgtcggtgttccggctttctgtcccagtgcagagtggagccacagtgca
agagcacccatggaggagccgacaggcaacaccgtggtcatccgcattggaatcccagac
ctacaacagacgaaatgtatgaaattcaatgtggatgctcctatttggctgtccaagcag
cggatcctgtgtactctcaaccagagcctgaaggatgtactcaactatggcctattccag
ccggcttacaacggcaaggctggcaagtttctggatgaggagagacagctaagggaatac
cccttcccatccatcgctcctgtaccttacctggagttccgctataaaagacgtgtctac
acccagactcacctggatgaaaagcagctgtctaagcttcacaccaagggttgcccttcc
tccctggagaggacagtggttgcagatccccatagtgacatacaggctaacctgaagaag
tttatggagtatgtgcagcagaggaacattgaaaaggtctcaaggttcttggaaaaaggc
ctggacccaaacttccatgatccagacacaggagaatgtcctctaacgctggcagcacag
ctggagggatgtgcagagctcatcaaggtgctgaagagtggaggggcacatctggatttc
agaacaaaagatggcattactgccctacacaaggccgtgcgcagcaagaaccatacagcg
cttataacactgttggacttgggtgcatcacctgactataaagacagcagagggctgact
cctctctaccatagctcgatggtaggaggagacccctactgctgtgagctgctgctgcat
gatcatgcacaggttggctgtgtggatgagaatggctggcaggagatacaccaggcatgc
cgctacggccacgtgcagcacctggaacacctgctgttctacggagctgacatgagcgcc
cagaatgcatctggaaacactgccctgcatgtgtgtgctctctacaatcaggatagctgt
gcacgagttctcctattccgggggggcaataaagagataaagaactacaacagccagacc
gcctttcaggtggctattatagcaggaaactttgatctggctgaaatcataaaggtccac
aaagtatcagatgttgtgcctttcagggagaccccctcctacaccaaccgccgacgtgca
attcctggccccctgccctcgccacgttccttgctccgctctgcaagtgacaacaacctg
aacggggaccacgatcacatccacggtcaggcccccagagaaatgcgtggccgtcagggt
cactcctctgtcccctcactgcgcagtctgccagctcttgggcagcagcacagcagcttt
ggagagagccgtcatggagagatccctgacagcagtctccaaagtacgggcagctcaaga
tcctcccattctcgctcgccttcactacatcacatgcacgaggaggacaagccggttccc
agaaggtcccacagccatggctaccctcacggatacagccatcgtggaagactcagccct
ggctcagtgcagcgagacccaagcccccctcatcacacccctgcagcgctgacgggcccc
cgcgggcccaagcggaaactctacagtgctgtcccaggacgtaccttcatcgtggtcaag
ccctacacgccacagggggagggagagatccaactcaaccgtggagagagagtcaaagac
tatgactgtaatgacgtagaagtgctgagtataggggaaggaggtttctgggaaggcacg
gtcaaagggaggacaggctggttcccagcagactatgtggaagaagttcagatgaggcag
tatgacccacggctagagactcgggaggaccgcactaagagactgtttagacactacact
gtgggatcctacgacaacttcacctcatacagtgactatgtcatagaggagaagaatgct
gttttacagaaaaaagaaaatgaggggtttggctttgtcctgcggggagccaaagctgag
acgcccattgaagagttcacccccaccccagcgttccctgcccttcagtacctggagtct
gtggacgtggagggagtggcctggagggctggtctgaggacaggagacttcctcattgag
gtaaacggggtgaatgtagtgaaggtgggccataagcaggtggtatccttgatccggcaa
gggggcaacaggctgctgatgaaggtggtgtctgtcacacgtaaacctgagtctgaggaa
gttgttcgcaagaaagctcccccaccacccaagagagctcccagcaccaccctgacactg
cgctctaagtccatgaccgctgagctggaagaattggcttctgctcggaggagaagagga
gagagactagatgagatgttggcatcccaggagtctatgttgcgttctcagccctctgag
acagattacagagcagccactgtcaaacaacggcctaccagcaggagaataacaccagca
gagatcagttcactctttgagagacaagggatgactctacatggaggtcttcacccaggc
attgagagaggtcacataccactaccaaaggggatgtccaggaccaagtcttttggtgcc
actgaggaggatcggctgtctgcccttgcaggcgagcacagatttccccgcagttcctct
atgacagacagcctcagagaccactcacagccccatcccatccctccacctccacaaatg
gcacctcctcctcctccctactaccttgacactggtcctcccccagccttctgcccccct
cctcccccatctaggacccagagtcagggccatgagcctggaggacgctccagcttcaaa
ccctcctccttggacctgccttatgaggccactcagcgccaggccacacacattgagcga
cagaagaaagctcgctccatgatcattctccaggactcttcccatctacctgtagaaccc
acagaaattccacgtccttctgctgctactccacctgagcgaatcaaaaggaagggtcgt
gttattgacaacccttatgctaatgtgggtcagtttagcattggactgtacacacccacc
aagccccagaggaagaaaagtcccctggtgaaacaactacaggtggaagatgcacaagaa
aaagctagtttggccttagctgctgcccactccagagagagctcaccctcaggacgacac
ccacatactcatgggcacacacacaccagccgtgcagactactaccagcagcagctgatg
gctgagcgagagcgtatgcgtgcccagggagagatgatgtttcagggtaaaggtcccttc
gccgctgcaattgctggagcggtgaaagatcgtgagcgccgcttggaggaacggaggaaa
tccactgtcttcctttctgttgggaccatggagggggcgtccaccaccagctctgatgct
ccctctttgactcagtctcactccatcgatgaacggatgctcacgcgagagcttggacag
ctgcctccccctgccttggccctgagcccctcacctagtgggaccacctttatccatccg
ctcacaggaaagcccctggaccccaactctccactggctcttgcgctggccgcaagggag
agggcactgacttcccagtccccagctagcagcccagagcctaggactaaacaggagcgg
gcaggccagggcataatattcattgaccctcagaccaaagagtctccacacggggaaggg
gcacacacatctccccctttctcgcctaacagcgccaaggcagcagggtatggagttccc
ccggcatcaattttagttccccagcccaccaaactccagtgggccacatcaccctcgcct
gtatcattccggcaggagatggaggccagagtagaggagaggaaggaggagaagagacta
gaggataaaaaaagtatgttgatcagtattatggatacgtcacagcagaagacagcaggg
ctaatcatggtccacgctaccagtaacggccaggctgttggtgtgggttcagaactagaa
cagacccctgccccaacgtccatggagcccagcaaatctccaagtccacgggctaaatcc
cccagtcccacagtctcccagtcccaggcccagcttcaggcacaacctcaaactccacgt
cctgccagtcccgcccaagagaagagtctggctcagggaagctcagaggaggatgtggat
ccatacacagtgaccctgccccctgcaatgttgtcctccagtgatgaggaaacaagagag
gagctacgtaagattggagttgttccaccaccagatgagtttgctaatgggctgctggca
caggcacaggggatgccagtgtccccagctaaacctgcctcctctgccaccacccctaca
acaccaacaccccaaactccctcaaccccaacaacaccaactatgacccccacccagcct
cagcctccccagcccccacctccacccagtgcagtagctgtctcagggaagccctctgac
cctctggagcccccaccggtgggcgagtctggctctgcagctgactcaggcgtggaggag
gctgacacgcgcagctccagcgagagagagcgagaccaccatctcgagaccaccagcacc
gtctccacggtttccagcatgtccacattgtcctcagaaagcggcgagcctgccgacaca
cacaccacgcacacctcctatgccgacgggcagacttttgtgctcgacaagccgccagtg
cctcctaagccccgactcaagtcccagataggaggcagtaaaggccccgtcaccttcagg
gaccctctgctgaagcagagctccgacagcgagctgctatcacagcaacaggctgcagcc
ctggctgctgctgcagctggaggagctgggctgccctcaggtggttcagcttcagtgact
ggactagcccccaccaagccgcgctacctctttcagcggaggtccaagctgtggggggac
ccagtggagcctcgtggcccaggggtggggctaggtattgggagtttgggcaatcttggt
gggctgggacttgggctgggtgcagatgagggagcaaaaccatctgttatgggggagctc
agttcacgactacagcagctaaataaagacactaggtcattgggagaggaaccaatggga
gcgtcacttgaccctgggaggaagtcacctgtggcaggtgccagacttttcagcagccta
ggcgagctccacacaatttctcagagaagttatggcaccacatacaccattcgccctggc
agccgttaccccgtcacccgacgcaccacaagcccaggttcaggctcacctgatcggggc
gaccctcttggacgattctcaagctacggcctaccgacctcaccgactacaccaccacaa
accatcctcaaatcctctagcctcagcctaccccaggagcctaaagaggtccgctttgta
atgaggagctccagcgcccgttcccgctctcgttccccttccccgtcaccttcccattcc
cctgggctggggtcaccccttttagccctccggcccttccaccagaaacccctccacctc
tggaataagtacgacgttggagactggctggagagcatcaatctgggggagcacagagca
gggtttcaggaacatgagatcgaaggctctcacctcccagctctaaccaaggatgacttt
gcagagctgggagtgacacgagttggacaccgcatgaacattgaacgagcactaaaactg
ctgctagagagctga
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integrated database retrieval system
