Siniperca chuatsi (mandarin fish): 122875593
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Entry
122875593 CDS
T08948
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04260
Cardiac muscle contraction
schu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122875593
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122875593
04261 Adrenergic signaling in cardiomyocytes
122875593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122875593
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122875593
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA_2
VWA
ArsR
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
122875593
NCBI-ProteinID:
XP_044050877
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Position
LG4:30785932..30947268
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AA seq
1105 aa
AA seq
DB search
MLGVGSRMEARTPGMRKLLGILGFFCLWITAQAQMKIPPETVQQWASVFSVELREFSTKY
SGSLLLQKKLKDVESIVKIVEVNGDDLVKEYSDEIERMLGSKMKSVKRLAESAEDADLYH
EFNASLSFDYYNSMLINTVDEDGNNVELGGEFPLEENEHFNKLLVNTQLSDIQIPTNVYN
KDPNILNAIYNSEALNDVFISNFQKDPTLTWQYFGSSTGFFRIYPGIKWTPDSNGVAAFD
CRNRNWYIQAATSPKDIIIMVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDY
VRYVEPCFRGTLVQADLDNREHFKLLVEDLHVKGEAKIKNAMKESFKILNEARVNGQGSM
CNQAIMLITDGAMEDFESVFEEFNWPDRRVRVFTYLIGREMTFAQNTKWIACNNKGYYTH
ISTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDTVLPNTKELFTTKAQSLLLMTS
VAMPVFSKKRETLSHGILLGVVGSDIPLMEVMKLAPRYMLGAHGYAFLITNNGYILAHPD
LRPLYKDGKKLKPKPNYNSVDLSEVEWEDTEEKLRTAMVKGETGSSSLSIRASVDKGKRP
LYLVNDYFYTNIDETPFSFGMVLTRGHGKLMIMGNVSVEEGLHDLTSPDLSIATEWTYCE
TDIDPSHRKYTQLQAAIRYLLGKEPDLKCDEVLLQQTLFDAVVTAPLEAYWNALMLNDRV
EPGVETAFLGTRAGLMRIMRYAGVETRVAKKFLTPADKDNLYTIDHFPLWYRLAVENTPG
SFYYYPVNDKGVKYIIATTAVTVSSEGKTAMAGAIGVQMSLDWLEKRFWAITKQPSDTDC
SNIEGVCPLSCESVDLNCFLVDNNGFTLLSKERSEVGRFFGEVDGSVMASLIKMGMFKKV
SLFDYQAMCKNSHHHANSARPLLSPFYGIAALIRWFFSNALMFLLDFNLCGLWHSDYFVD
AKAGYHTSHKQKKVEALQPCDTAYPGFMYDPSVREANSLIKCGRCQKMFVVQQIPDSNLV
LVVTQADCDCSRQYGPILLEPKEIKYNATVKCNRMKSQKVRRRPESCHAYHPKEDAKDCG
GAAAISLSLSLFSASLLVSSLHRWT
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagttggaagcaggatggaggccaggacgccgggaatgaggaagctcctgggg
attctgggatttttctgcctgtggattacagctcaggctcagatgaagatcccaccggag
acggtgcagcagtgggcgtctgtgttctctgttgagcttcgagagttctccaccaaatac
tccggctctctgctgctgcagaagaaactgaaagatgtcgagtccatcgttaagatcgtg
gaggtgaacggagacgacttggtgaaggaatactctgatgaaatcgagcgaatgttggga
agcaagatgaagtcggtgaagaggttagcggagtctgcagaggatgctgacctgtaccat
gaattcaacgcttcattatcgtttgattactacaactccatgctgatcaacacggtggac
gaggacgggaacaacgtggagctgggcggcgagtttcccctggaggagaacgaacacttc
aacaaactgctggtgaacacgcagctgagcgacatccagattcccaccaacgtctacaac
aaagatcccaacatcctcaatgccatctacaactctgaggcgttaaacgacgtcttcatc
agtaacttccagaaggatccgacgctcacctggcagtacttcggcagctccaccggtttc
ttcagaatctaccccggtattaaatggactccagactccaacggtgtggcggcttttgac
tgcaggaacagaaactggtacatccaggcagccacgtctccgaaggacatcatcatcatg
gtggacatcagcggcagcatgaaggggctgaagatgaccatcgccaaacacaccatcaac
accatcctggacacactgggagagaacgacttcgtcaacgtcatcgcttacactgactat
gttcggtacgtggagccgtgcttcagaggaactctggtccaggccgacttggacaacaga
gagcactttaagctgctggtggaggacctgcatgttaaaggagaagcgaagatcaagaac
gctatgaaggaatccttcaaaatcctcaatgaggcgagggtgaacggtcagggcagcatg
tgtaaccaggccatcatgctgatcacagacggagccatggaggactttgagtctgtcttt
gaggagttcaactggcctgatcgcagggtgcgagtcttcacctacctgatcggcagagag
atgaccttcgctcaaaacaccaagtggatcgcctgcaacaacaaaggttactacacccac
atctccacgctggccgacgtgcaggagaacgtcatggagtacctgcacgtgctcagccga
ccaatggtcatcaaccacgaccatgacatcatttggacggaagcctacatggacactgtg
cttcccaacaccaaggagctcttcaccaccaaagctcagagtctgctgctgatgacttca
gtggccatgccggtcttcagcaagaaaagggaaacgctgtcccatgggatcctgctgggt
gtggtcggctccgacatcccactgatggaggtgatgaagctggcacccagatacatgctg
ggagctcacggctacgccttcctcatcaccaacaacggttacatcctggctcatcctgac
cttcgacctctgtataaagatggaaagaaactgaagccaaagccgaactacaacagtgtg
gatctgtctgaggtggagtgggaggatacagaggagaagctgagaacagccatggtgaag
ggagagactggcagcagcagcctgagcatcagagcgtcagtggataaagggaaacgacct
ctgtacctcgtcaatgactacttctacacaaacatcgatgagacacctttcagcttcggc
atggtgctgacgaggggtcacggaaagctgatgattatgggaaatgtgtctgtggaggaa
ggcctgcatgatctcacctccccagacctcagcatcgctactgagtggacgtactgtgag
acggacatcgaccccagccaccgaaaatacactcagcttcaagccgccatccgctacctg
ctgggcaaggaacccgacctcaagtgcgacgaggtgctgctgcagcagactctgtttgac
gccgtggtaacggctccgctagaagcctactggaacgccctgatgctcaacgacagggtg
gagccaggggttgagacggccttcctcggtactcgtgccggcctgatgaggatcatgaga
tacgcaggagtggagaccagagtggcaaaaaagtttctgactccggctgataaagacaac
ctgtacaccatcgatcacttccccctgtggtaccgcctggccgtggaaaacactcctgga
agcttctactactaccccgtcaacgacaaaggagtgaaatacatcatagcgacgacagca
gtgacggtgtcatctgaaggaaagacggccatggctggagctatcggggtgcagatgtcc
ttggattggctggaaaaaaggttctgggccatcacgaagcagcccagcgacactgactgt
tcaaacatcgaaggcgtgtgtcctcttagctgtgagagtgttgatctgaactgtttcctg
gtcgacaacaatggcttcaccctgctgtccaaagagaggagcgaggtcggccgtttcttt
ggcgaggtggacgggtctgtcatggcgtcgctgatcaagatgggaatgttcaaaaaagtg
tctttgtttgactaccaggcgatgtgtaagaacagtcatcatcacgccaacagcgcccgg
cctctgctcagtccgttttatggcatcgcggcgttgataagatggttcttctccaacgca
ctgatgttcttgctggactttaatctctgtggtctctggcactctgattattttgtggac
gccaaggctggttatcatacaagtcataagcagaagaaggtggaggctctgcagccctgc
gacacggcgtatcccggcttcatgtacgacccatccgtcagagaggccaacagcctcatc
aagtgtggacgctgccagaagatgtttgtggtgcagcagatccctgacagtaacctggtt
ctggttgtgactcaggccgactgtgactgttctcgtcagtatggacccatcctgctggag
cccaaagagatcaaatataacgccacagtgaagtgcaacaggatgaaatcccagaaggtg
cggcggcgtccggagtcgtgccacgcctaccacccaaaggaagatgctaaggattgcggc
ggggcggcggccatctccctgtcgctctctctcttctcggcctctctgctcgtctcgtcg
ctccaccgctggacgtaa
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