KEGG   Siniperca chuatsi (mandarin fish): 122875685
Entry
122875685         CDS       T08948                                 
Symbol
cldn5a
Name
(RefSeq) claudin 5a
  KO
K06087  claudin
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03272  Virion - Hepatitis viruses
schu04382  Cornified envelope formation
schu04514  Cell adhesion molecules
schu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    122875685 (cldn5a)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    122875685 (cldn5a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    122875685 (cldn5a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    122875685 (cldn5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:schu03037]
    122875685 (cldn5a)
   04147 Exosome [BR:schu04147]
    122875685 (cldn5a)
   04515 Cell adhesion molecules [BR:schu04515]
    122875685 (cldn5a)
Cilium and associated proteins [BR:schu03037]
 Other cilia and associated proteins
  Stereociliary proteins
   122875685 (cldn5a)
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   122875685 (cldn5a)
  Exosomal proteins of colorectal cancer cells
   122875685 (cldn5a)
Cell adhesion molecules [BR:schu04515]
 Immunoglobulin superfamily
  L1 family
   122875685 (cldn5a)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 MFS_MOT1
Other DBs
NCBI-GeneID: 122875685
NCBI-ProteinID: XP_044051000
LinkDB
Position
LG5:complement(25084213..25086008)
AA seq 215 aa
MVSAGLEIMGLSLCAIGSLLVMVSCGLPMWKVTAFIEANIVVAQTIWDGLWMTCVVQSTG
QMQCKVHDSVLALSHDLQAARALTIISSVMGVLGLMVVIAGAQCTNCLQTEYVKARVVNA
GGVIYIISGLFVLVPLCWMANNIISDFYNPQVPASKKREIGAALYIGWAASALLLIGGAL
LCCSCPSSGNSGYSVKYAPTKRTTPNGDYDKRNYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atggtgtcggccggactggagatcatgggactatcgctgtgcgcaattggctcgctcctg
gtgatggtttcgtgcgggctgcccatgtggaaggtgacggctttcatcgaagccaacatc
gtggtggctcagacaatctgggacggcttgtggatgacgtgtgtggtgcagagtacaggc
cagatgcagtgcaaggtgcacgactcggtcctcgccctcagccacgacctgcaggcggcc
agagcgctcaccatcatctcctcggtgatgggcgtgctggggctcatggttgtcattgcg
ggggcgcagtgcaccaactgcctccaaactgagtacgtcaaagcccgggtggtgaacgcc
ggaggggtcatctacatcatcagtggtctgtttgtgctggtgcctctgtgctggatggcc
aacaacatcatatcagacttctacaacccgcaggtgcccgcatccaagaagagggagatc
ggcgctgcgctctacatcggctgggcggcctcagcgctgctgctgatcggaggagcgctg
ctgtgctgctcctgtccttccagcgggaactctggatactcggtaaaatacgcaccaaca
aagagaaccacgccgaacggggactatgacaagaggaattatgtgtag

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