Siniperca chuatsi (mandarin fish): 122875685
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Entry
122875685 CDS
T08948
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03272
Virion - Hepatitis viruses
schu04382
Cornified envelope formation
schu04514
Cell adhesion molecules
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122875685 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122875685 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122875685 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122875685 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122875685 (cldn5a)
04147 Exosome [BR:
schu04147
]
122875685 (cldn5a)
04515 Cell adhesion molecules [BR:
schu04515
]
122875685 (cldn5a)
Cilium and associated proteins [BR:
schu03037
]
Other cilia and associated proteins
Stereociliary proteins
122875685 (cldn5a)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
122875685 (cldn5a)
Exosomal proteins of colorectal cancer cells
122875685 (cldn5a)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
L1 family
122875685 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
122875685
NCBI-ProteinID:
XP_044051000
LinkDB
All DBs
Position
LG5:complement(25084213..25086008)
Genome browser
AA seq
215 aa
AA seq
DB search
MVSAGLEIMGLSLCAIGSLLVMVSCGLPMWKVTAFIEANIVVAQTIWDGLWMTCVVQSTG
QMQCKVHDSVLALSHDLQAARALTIISSVMGVLGLMVVIAGAQCTNCLQTEYVKARVVNA
GGVIYIISGLFVLVPLCWMANNIISDFYNPQVPASKKREIGAALYIGWAASALLLIGGAL
LCCSCPSSGNSGYSVKYAPTKRTTPNGDYDKRNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggccggactggagatcatgggactatcgctgtgcgcaattggctcgctcctg
gtgatggtttcgtgcgggctgcccatgtggaaggtgacggctttcatcgaagccaacatc
gtggtggctcagacaatctgggacggcttgtggatgacgtgtgtggtgcagagtacaggc
cagatgcagtgcaaggtgcacgactcggtcctcgccctcagccacgacctgcaggcggcc
agagcgctcaccatcatctcctcggtgatgggcgtgctggggctcatggttgtcattgcg
ggggcgcagtgcaccaactgcctccaaactgagtacgtcaaagcccgggtggtgaacgcc
ggaggggtcatctacatcatcagtggtctgtttgtgctggtgcctctgtgctggatggcc
aacaacatcatatcagacttctacaacccgcaggtgcccgcatccaagaagagggagatc
ggcgctgcgctctacatcggctgggcggcctcagcgctgctgctgatcggaggagcgctg
ctgtgctgctcctgtccttccagcgggaactctggatactcggtaaaatacgcaccaaca
aagagaaccacgccgaacggggactatgacaagaggaattatgtgtag
DBGET
integrated database retrieval system