Siniperca chuatsi (mandarin fish): 122875715
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Entry
122875715 CDS
T08948
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122875715 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122875715 (utp15)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122875715 (utp15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
UTP15_C
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
PAC11
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_ACSF4
DSE1_N
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Beta-prop_WDR41
Beta-prop_NWD2_C
KNTC1_N
Utp12
Motif
Other DBs
NCBI-GeneID:
122875715
NCBI-ProteinID:
XP_044051058
LinkDB
All DBs
Position
LG5:25451691..25457673
Genome browser
AA seq
531 aa
AA seq
DB search
MASFKPTKIQVYPKLGEKVTQDTLYWKNYKAPVQIKEFGSITNIDFSPVAPHNFAVTAFT
RIHIYGPFSQEPVKTFTRFKDTAYCGRFRSDGQLLVAGCEDSVVRLFDVSGKVALRMFKG
HTKAVHVTDFTSDRYQILTGSDDYTCRLWDIPNSTELTTYQEHTDYIRCGVTSKLNRDLF
ITGSYDHTLKLFDARVDKSVMTMDHGQPVESLLLYPSEGLLVSAGGRYVKVWDLLKGGHP
LVSLKNHHKTVTCLCLSGNGQRLLSASLDRHVKIYNTTNYKVVHNFDYAASILSLALAPD
DESIVVGMTNGILSIKHRKSLEESKEMSGQQRRRPSYRVFVKGKNYVPKQDDYLVSKPVK
QHLAKYDKQLKKFNVSKALDTALETWTRLRKPEITVAVIKELDRRGTLKNALAGRDEQGL
SRLLNFLIGNLVDPRFAPVLVTAAEMILDIYRSVISQSPVVDRQLLRLQELLEREIDYQQ
DLLEVLGMLDTMFASSLPRKEVPCPGISRSNGLAQGEASTSRTQLQATRGL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttaaacctacgaaaatccaagtctatcctaaacttggagagaaagtcaca
caagacacactgtactggaaaaattacaaggccccggtccagataaaagaatttggatca
atcacaaacatagacttctccccagtggctccacataactttgctgtgacagcattcaca
agaatccacatttacgggcctttctcccaggagcctgtaaagacctttacacggtttaag
gatactgcatactgtggcaggttcaggtcagatggtcagcttctcgtggcgggatgtgag
gactctgtggtccggctgtttgatgtcagtggcaaggtggcactccggatgttcaaaggg
cacacaaaggctgtacatgtaacagacttcacctcagaccgttaccagatcctcacaggg
tcagacgactacacatgtcgactttgggacatcccgaattccactgagctcaccacctac
caagaacacacagattacatccgttgtggtgtcacaagcaaactcaacagagatctcttc
attaccggatcttacgaccacacactgaaactgtttgatgcccgagtggataagagtgtg
atgaccatggaccatggccagccagtggagagtctgcttctctatccttctgagggactc
ctcgtctctgcaggggggcgctatgtaaaagtgtgggatctgctaaaaggcggccaccct
ctggtgtcactgaagaaccatcacaaaactgttacctgtttgtgtctcagcggcaacgga
cagagactgctgtcagcttctctggacaggcatgtaaagatttacaacacaaccaactat
aaagtggtccacaactttgactatgctgcctccatcctcagtctggctttggctccggat
gatgagtccattgttgtgggtatgaccaatggtattctgagtatcaaacacaggaaaagt
cttgaagagtcgaaggaaatgtctggccaacagaggcgacggccgtcttatcgtgttttt
gtgaaggggaagaactacgtccctaaacaggatgactatctcgtcagtaagccagtgaaa
caacatttggccaaatacgacaagcagctcaagaaatttaatgtatcgaaggctttggat
acagctctggagacatggacaagattgagaaagccagagatcacagttgctgttataaag
gagctggatcgaagaggaacgttgaagaacgctctggcaggaagggatgaacaggggctg
tctcggttgctcaacttcctcatagggaacttggtcgaccccaggtttgctcccgtcctc
gtaacggcagctgagatgatcctcgacatctatcgatcagtaatcagtcagtcgccagtc
gtggaccgacagctgctgcgtctgcaggagctgctggagagagagatcgactaccagcag
gatctcctggaggtgctgggcatgttggacacaatgttcgcctcctccctccctaggaag
gaggtgccttgccctggcatcagcaggtctaacggcctggctcagggagaagcaagtacc
tcaagaacacagcttcaggccaccagaggcctgtag
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