Siniperca chuatsi (mandarin fish): 122875845
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Entry
122875845 CDS
T08948
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122875845
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122875845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
122875845
NCBI-ProteinID:
XP_044051343
LinkDB
All DBs
Position
LG5:complement(27708434..27724040)
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AA seq
1209 aa
AA seq
DB search
MSENDSSFPAQIFSANRYKAIDYVFETTTSLKVMMNLLALPTPYFTGTSDLYPHSGKLPE
VTYRTPWIRGKVISTCKLFVSGSVLDDLGEKKQPVNSPERFNVTLSEVNGDEEVIPSSNP
DSLKDLDQDEYVCLLKESQIKDPGQESFFKWTTDQMKPGNKNKDLLLQEELMVVDYLPQF
KRHLPTLKAKLSRLRTLPVADPLLSSTGDTISEHTIFRHCASYEKPPDVNTSGIQTCTNI
HEEFCKESLMKEECLLLPVVVDTLNLSPENCTAFSSICGHMNVAPEQLDEQPPVLDVLRK
DVSVSVDISQYEIPEEPSRKCKKNGGLMESELAGRSMLPAEMELDVTLTPRTKCQTQICL
SACKLQKEALSPLRRRCLVSTRAQKEMETALWKAEKHPTFVVGFLLAERQIHEPAVDFQP
LSEALRVIKLENQSFVGIGDKQQAQMGCIITPQVYLCSEREFTESMRSEFPSTEQEKMED
FRKLSPEHVEFRSILKNPTNKTLKKSETAVFHAGDTADDTLLQKETVADTSQNTFLVHTV
NTNNKDVKPAATTKDEVSDKRFPEVADDCKTEQSTHTPEQATSSRLNSRDNHRGLLVTRR
PPEKDLDPLSTFMILRSQQTAPVTATPQSLVSTPAPQMEQRTPPPELQPPPPEQMQRSDR
RPMYMSSAVTGNATREQKAAFQSTGQLISHPVSPSIPQDSRVVQVQATDSQQRAYCELLA
FAQPCLSSARQLGLNFSAWGDFSCLAPDQTHFLLKQQEKALCRTHAQSAELVRDRELLFN
QAALIHVLVTFKELLLKCDLSTALEYLTKAAEACAEQSLEQLVKRLQIILYLSQKNQESD
LKLLELQQLLAARLHSRKGQNDVEKILVLISVDSDDSRSVIINSLSQVTGAAVTAVCPEE
DKKTLNGAGVVSSMRDSVCVVVYEQHVGADFPWSHFCLVVEYDHPGQSPWATVCRDRSIS
HLTFNTIICDTEKEKASWFLEDNVPYVLFVTEGLVNCPLLLQTLESGFNITVLERSHCPS
LQMLGGTHRYVVITVDESTAIIIQEEDELCQERASEGVVMRLTALSLQYSCCWLILHCPD
SQGGGFSSEAFSNLVLVYSSLVLFGMKSEDLDVKVLIVSEVVEIAKWISQICFHSLMASD
RDPLNCLDRDWLTVIPSEEEKCLLQFPCINPMVSQLMLRRAPSFQWLLRAPLSQLKELLP
EVPHKVLKC
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacgacagcagttttcctgctcagattttctctgctaacagatacaaagca
atcgactatgtttttgagaccaccaccagtctgaaagtaatgatgaacttgctggcactg
ccaacaccttacttcactggtaccagtgacctgtacccccacagtggcaagctgccggaa
gtcacctacaggacaccgtggatcagaggaaaggtgatctccacctgcaaactctttgtc
agcggttctgtgctcgatgacctgggagaaaaaaagcaaccagttaattcaccagaaaga
tttaacgtgactctgagtgaggtgaacggggatgaggaggtgatacccagctctaatcct
gactcattgaaggatctagaccaggatgagtatgtttgccttttaaaggagtcacagatc
aaagatccaggtcaggaatcatttttcaagtggacaactgaccagatgaaacctggaaat
aagaacaaagatctcctcctgcaagaagagctcatggttgttgattacctgccacaattt
aagagacatttacccacgctgaaagccaaactgtccaggctgaggacccttcctgttgcc
gaccctctgctgagctcaacaggagataccatctccgagcacaccatattcagacactgt
gcgtcttatgaaaaacctcctgatgtgaacaccagtggcattcagacgtgtacaaacatt
catgaggagttttgtaaagagtcactaatgaaagaagagtgtctgctgttaccggttgtg
gtggacacactgaatctgagtccagaaaattgcaccgccttttcaagcatttgtggtcat
atgaatgttgctcctgaacagctggatgagcaacctccagttctggatgtgcttcgtaaa
gatgtgtcagtgtcggtggacatttcccagtatgaaataccagaggagcccagcagaaaa
tgcaagaagaatggaggcctgatggagtcagagttggcaggacgttcgatgcttccggct
gaaatggagctggacgtgactttgactcccaggactaagtgtcaaacccaaatctgtctg
tccgcatgtaaactccagaaggaagcgttgtcgccgctccgcagacgatgtttggtgtca
acgagagctcagaaagagatggagacggcactttggaaggcagagaagcatccaacgttt
gtggtgggcttcctgttggcagagcgtcaaatacatgaaccagctgtcgacttccagcct
ctgtctgaagccttgagagtcataaagttagagaatcaaagctttgtcggcattggtgac
aaacagcaggcacagatggggtgtattataaccccacaggtgtatttgtgcagcgagcgt
gagttcacagagagcatgaggtctgagtttccctccaccgagcaggaaaagatggaagac
ttcagaaaactgtcacctgaacatgtggagttcagatccatcctgaagaatcccacaaac
aaaactctgaagaaatctgaaactgctgtttttcatgctggagatactgcagacgacacc
cttcttcaaaaagaaacagttgctgatacgtctcagaacaccttcctggtgcacactgtc
aacacaaacaataaggacgtaaagcctgctgctaccaccaaagatgaagtttcagacaaa
aggtttccagaagttgcagacgactgtaagacagagcagagcacccacactcctgagcag
gctacgtcctccagactgaatagcagagacaatcacagaggtctgctggttacgagacgt
ccaccagagaaggacctcgaccctctgtccaccttcatgatactgagatctcagcagaca
gctccagttactgcaacacctcagagcttagtcagcactccagcaccacagatggagcaa
cgaacaccaccacctgagctgcagcctcctcctccagagcagatgcaaagatcagacagg
aggccaatgtatatgagcagtgctgtgacaggaaatgctaccagagagcagaaagcagct
tttcagtcgactggtcaactcattagtcatcctgtcagtccgtccatccctcaggacagc
agagtagtacaggtccaagctactgacagccagcagcgtgcctactgtgagctgctggcc
ttcgctcagccttgtttgagttctgccagacagctggggctcaacttctcggcatgggga
gacttcagctgcctggccccagaccaaacacacttcctcctcaaacagcaggagaaggca
ctctgcaggacacatgcacagagcgcagagcttgtcagagatcgggaactgcttttcaac
caggcggctctgattcatgtgctggtgacgttcaaggagctgctactgaagtgcgacctc
agtactgcactggagtacctgaccaaggcagctgaggcgtgtgcagagcagagtctggag
cagctggtgaagaggctgcagatcatcctctacctcagtcaaaagaaccaggagtccgac
ctcaaactgctggagctgcagcagctgctggctgcacggctgcacagcagaaaaggacag
aacgatgtggagaaaattcttgtcttaatatcagtcgactctgacgacagcagatctgta
atcatcaacagcttgagccaagtgactggtgctgctgtaactgcagtttgtcctgaggag
gacaagaaaacgttgaatggtgccggtgtggtcagcagcatgcgcgacagtgtgtgtgtg
gtggtgtacgagcagcatgtaggagccgacttcccctggagccatttctgtctggtggtg
gagtacgaccatccaggccagtcaccatgggccacagtctgcagagacaggagcatcagt
cacctcaccttcaacacaatcatctgcgacactgagaaagaaaaagcctcgtggttcctg
gaggacaatgtgccatatgtgttgttcgtgacagaggggcttgtcaactgtccactgctg
ctacagacactcgagtcagggtttaatataactgtgctggagaggagccactgtccgtcc
ttgcagatgctcggagggacccatcgctacgttgtgatcacagtggatgaaagcaccgca
atcataattcaggaggaggatgaactgtgtcaggagcgagccagtgagggagtagtgatg
aggctgactgctctctctcttcagtacagctgctgttggctcatcctgcactgcccagac
agccagggaggaggattttccagcgaagccttcagcaacttggtgttggtttattcgtct
ctggtgctgttcggcatgaagtcagaggatctagacgtgaaggtgctgattgtgtctgag
gtggtggaaatagccaaatggatcagtcagatctgctttcacagcctgatggccagtgac
agggaccctctcaactgcctggacagagactggctgactgtgattccctcagaggaggaa
aagtgtctattgcagttcccatgtattaaccctatggttagtcagctaatgctgaggaga
gcaccatccttccagtggctcctgagggcccctctgtctcagctgaaggagctgctccct
gaggtgccacacaaagtcctcaagtgttga
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