Siniperca chuatsi (mandarin fish): 122875920
Help
Entry
122875920 CDS
T08948
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03440
Homologous recombination
schu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122875920 (top3b)
03460 Fanconi anemia pathway
122875920 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122875920 (top3b)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122875920 (top3b)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122875920 (top3b)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Topoisomerases
122875920 (top3b)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122875920 (top3b)
FA (Fanconi anemia) pathway
122875920 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
122875920
NCBI-ProteinID:
XP_044051529
LinkDB
All DBs
Position
LG5:30564852..30621948
Genome browser
AA seq
866 aa
AA seq
DB search
MRTVLMVAEKPSLALSIAKILSKGNCTSRKGLNGACSVHEYTSSFQGQTVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEARGCDYVVLWLDCDK
EGENICFEVLDAIQSVMNKGSVREQSIYRAKFSSITETDIWNAMNRLGVPNHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVFKGKDSQLTLDWNRVRVFDREVGQMFINLAKTSREAKVDTVIKKEKTKQRPHA
LNTVEMLRVASSALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKETLKQHTNN
PIWEEEVRTTVEPRVKALLSTGLNRPRKGTDAGDHPPITPMRAASEGELGSDGWRLYEYI
TRHFIATVSQDCKYLQTTIDFNIGTEAFSCSGKTLISPGYTVVMPWQGIPLEEAMPACER
GDTFTVDEIKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVENG
RKLKPTNLGIVLVHGYYKTDAELVLPTIRSAVEKQLNLIALGKANYQQVLQHTLDIFKRK
FHYFVDSITSMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSL
SQNGAIKLYKELRCPLDDFELVLWTSGARGKSYPLCPYCFSNPPFRDMKKGMGCNECTHP
SCQHSLNSLGIGQCVECDSGVLVLDPISGPKWRMACNKCNVVVHFFEHAHRVQVAQESCD
ACDASLVAVDFNKTRTPLPAGETQHTGCVFCDLVFQDLVELKHATMRHSIHRGGGARRGG
RGRGRGRRGNLKKPKDKMAALAAYFV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgttttgatggtggcagagaaaccatcgttggccctgtcgattgccaaaatc
ctctctaaaggaaattgtacaagtcgcaagggactcaacggagcatgctcagtgcatgaa
tacaccagcagcttccagggccaaactgtacgctttaagatgacttctgtttgcggacat
gtgatgagtctggatttcatcgggaagtacaacaactgggacaaggtggaccctgcggaa
ctctttagcaaagctcccacagaaaagaaggaggccaaccccaaactcaacatggtcaag
ttcctccaggttgaagccagaggctgtgactacgtggttttatggttggactgtgataaa
gaaggcgagaacatctgttttgaggtactggatgccatccaatcagtgatgaacaagggg
agtgtcagggagcagagcatttaccgtgccaaattcagctccattactgagacggacatc
tggaacgccatgaaccgcctgggagtgcccaaccacaatgaagccctgtcagtagatgca
cgtcaggagctggatctgcgcatcggctgtgccttcacacggtttcagaccaagtatttc
cagggcaaatacggcaatctagactcctccttgatctcatttggaccatgccagacccca
acactaggcttctgtgtggaacgccatgacaagatccagtcctttaaaccagagacttac
tgggtcctccaggcaaaggtgttcaaaggaaaggacagccaactgacactggactggaac
agggtgagggtcttcgacagggaggtgggtcagatgttcatcaacctggccaagacatcc
agggaggccaaggtggatacagtgattaaaaaagagaagaccaagcagaggccccatgct
ttgaacacagtggagatgttgagagtggccagctctgccttaggcatgggtccccagcat
gccatgcagattgcagagcgcctgtatacacagggctatatcagctacccacgtactgag
acgacccactacccagagaacttcgacctgaaggaaacactaaagcagcataccaacaat
cccatctgggaagaagaggtgaggactactgtggagccaagggtgaaggctctgctttca
actggattaaaccgacccaggaaaggaactgatgctggagaccatccacctatcactccc
atgcgtgctgcctcagaaggggaactgggaagtgatggctggcggctatacgagtacatc
acacggcatttcattgccactgtcagtcaggactgcaagtacctacagaccaccatagac
ttcaacattggcacagaggccttctcatgtagtggcaaaactctgatatcaccaggttac
acagtagtgatgccgtggcagggcatccctctggaagaggccatgccagcttgtgagcgt
ggagacacgttcacagtagacgagatcaagctgttggaaaagcagaccagccccccggac
tacctgactgaggctgaactcatcaccctcatggagaaacatggcattggtactgatgcc
agcatccctgtccacatcaacaacatctgccagaggaattatgtgacagtagagaatggg
cgcaagttgaagccaaccaaccttggtattgtcctggtacatggctactacaagacagat
gcagagctggtgctgcccaccatacgcagtgctgtggagaagcagctgaaccttatcgca
ctgggtaaggccaactaccagcaggtcctgcagcacacgctggatatcttcaagaggaag
tttcactactttgtggattccatcaccagtatggatgagctgatggaagtctccttttca
cccattgctgctactggaaagcccctgtcccgctgtggcaagtgccaccgcttcatgaag
tacatccaggccaagcccagcaggctccactgctcccactgcgacgagacctacagtctt
tcccagaatggagccatcaagctgtacaaggagctccgatgtccactggatgactttgag
cttgtgctgtggacctctggggcccggggaaagagctaccccctgtgcccctactgcttc
agcaatccgcctttcagggacatgaagaaaggtatgggatgcaatgaatgtacccatccg
tcttgtcagcactctctcaactctttgggcattggacagtgtgtggagtgtgacagtggg
gttttggtgctggatcccatctctggaccaaaatggaggatggcttgtaataaatgcaac
gtggtggtgcacttttttgaacatgcacacagagtgcaggttgctcaggaaagctgcgat
gcctgcgacgcctctctggttgcggtggacttcaacaagactcgtactccactccctgca
ggcgagacccaacacaccggctgtgttttctgtgatctggtcttccaggatctggtggag
ctcaaacatgccaccatgaggcactccatacatcggggagggggtgcaagacgaggagga
cggggacgtggcaggggacgccgtggcaatctgaaaaaacctaaagacaaaatggctgcc
ttggcagcttactttgtatag
DBGET
integrated database retrieval system
