Siniperca chuatsi (mandarin fish): 122875927
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Entry
122875927 CDS
T08948
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
schu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122875927 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
122875927 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122875927 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122875927 (gtf2h2)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122875927 (gtf2h2)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122875927 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
122875927
NCBI-ProteinID:
XP_044051551
LinkDB
All DBs
Position
LG5:complement(30723345..30732198)
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AA seq
426 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIEIHGQVRLGMMRH
LYLVIDCSRSMEDQDLKPNRLASTLKLMEAFVDEYFDQNPISQVGIITTKNKRAEKLTDL
AGNPRKHIAALKKAVDTVCVGEPSLYNSLNLAIQTLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETCGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTIASLTDQDAKPSFSMSHLDSSSGPGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQDFIESPVEELQEDRYSSVHHVAVCSVWSVIS
SSMTRCTAAPAVFTVIAPPEAEMLTVRQRLKQIQWSCICPYWRIISFLSVLSTSNRTYMI
NGPSKW
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagccaagcgctgggaagggggctatgagaggacatgggag
gtgttgaaggaggacgaatctggctcactcaaagccacagtggaagagatcctgttccag
tctaaaaggaaaagggtgatagagatccatggacaagtgaggcttggaatgatgcgtcac
ctctatctggtgattgactgttcaagaagtatggaagaccaggacttgaaaccaaaccgc
ctcgcatctactctaaagttgatggaagcttttgtcgatgaatattttgaccaaaacccc
atcagtcaggtgggcattatcaccacaaagaataaaagggctgagaagctgactgaccta
gcaggaaatccaaggaagcacattgctgctctgaagaaagcagtggacactgtgtgtgtt
ggagagccatctctgtacaactctctcaacctggccatacagaccctcaagcacatgcct
ggacatacgagccgggagatcctgataatcctcagcagcctcaccacatgtgacccagcc
aacatctatgagctgatcaagaccctgaagtctctgaaggtgcgagtgtcagtaatcgga
ttgtcagcagaggtccgggtgtgtacggtgttgaccagggagacatgcggctcgtatcac
gttatcctggacgagagtcacttcaaagagctgctgatgctgcatgtcaaacctcctcca
gccagctcctcatctgaatgctctttaatacgcatgggttttcctcagcacaccatcgcc
tctcttactgaccaggatgccaagccttcattcagcatgtctcatctggacagcagcagt
ggtccaggtctgtctctgggaggatacttttgtccgcagtgccacgccaagtacacagag
cttcccgtggagtgtaaagtctgtggtttgactctggtgtcggccccccatctcgccaga
tccttccaccatctcttccccctccaagactttatagagagtcctgtggaggagcttcaa
gaagacagatattcatctgttcatcatgtcgcagtgtgttctgtgtggagtgtgatctct
tcatccatgactcgctgcactgctgcccctgctgtattcacagtcatagcgccccctgaa
gctgagatgctaactgtcagacagagactgaaacaaattcagtggtcatgtatttgccct
tattggcgcatcatatccttcttatcagtgttatccacctctaataggacatatatgatc
aatggaccatctaaatggtaa
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