Siniperca chuatsi (mandarin fish): 122875943
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Entry
122875943 CDS
T08948
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122875943 (zfr)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122875943 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
122875943
NCBI-ProteinID:
XP_044051581
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All DBs
Position
LG5:complement(31530271..31582650)
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AA seq
1071 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAATAAAYGGYQPTHAATDYGYPQRQPEV
PPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPSATAAVAAAQPQPSVADSYYQTA
PKPGYSQGVTSYTQSQQTRQVTVIKPAAPSPASSTFSIYPVTSTVQPVAAAASVVPSYSQ
SPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAVAAVAATAAWTGNTFTKKPP
FQNKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSGSSGS
GGGVLARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMVT
QTSSSTTATLSKTTTATLSSSSTTGSLCVAASSSSPATSPPYLKPVNIVSSGVAGVKNPL
ANSLSAANSASAGKKINTPKINFVGGNRLQTTVKMEEARAETKVEASKPVTPSSGTQDPK
TEVSDSLSTSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLK
GRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRY
EEDMYWRRMEEEQHHHWDDRRRIPDGGYPQGPPGLLGVRPGMPGLQPQGPLPPRRPDSSD
DRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKAKEEDKEKKEPSKDRA
LKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKGLLTCIVEHLPKQLTMVTPEKYEVKG
SIQEAAIILTSCTEPKMQVTITLTSPVIREENGRDGDVTSGMVKDPADVLDRQKCLDALA
ALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAISSASAPLSP
GDALRRVFECISSGILLPGGPGLVDPCEKKSVDTLTPMGEQQREDITSSAQFALRLLAFR
QIHKVLGMDPLPQINPRFNIRNSRKRRRDNSDGTDSFEGEGKKDKKDYDSF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtggtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaattactttggatttacccatggcgctgccgcccagtacagt
cagcagccagctgccggggtagcatacacacatcccaccacagtggccagttacacagtt
catcaagcacctgtggcggcacacaccgtagcggcagcctacgctcctactgcagccaca
gttgctgtagctaggcctgcacctgttgctgtggcagctgctactgctgcagcttacgga
ggataccagccaacccatgctgctactgactacggctaccctcagcggcagcctgaagtc
cctccaccaccaccgccggtcacctcacagaactaccaggactcctactcctatgtccgg
tccacagctccagctgtagcttatgacagtaagcagtactaccaacagcccagtgctaca
gcagctgtcgctgctgcacaaccacaacccagcgtggcagattcctactaccagacagcc
cccaaaccaggatatagccaaggggtaacatcatacactcagagccagcagactcgacag
gtgaccgtgataaagccagctgctcccagtccagcctcatctactttctccatctaccca
gtgacctccactgttcagcctgtggccgctgccgcctctgtggtcccttcttactcccaa
agcccaacctacagcacaaacgctgtcacatactctggaacctcatactcgggctacgag
gcagcagtttactcagcagcctccagctactaccagcagcagcagcagcagaagcaggca
gtggcagctgtagcagccacagcagcatggactgggaacactttcaccaagaaacccccc
tttcagaacaagcagctccggcccaagcagccgcccaaaccccctcagatccactactgt
gatgtctgtaagatcagctgtgctggcccacagacttacaaggagcatctggaaggccag
aagcacaagaagaaggaagctgcactgaaggtttcccagagcagcggcagcagcggtagt
ggtggaggggtattggcccgcaatgctcagaatcagctccgctgtgaactttgcgatgtt
tcctgcactggcgccgacgcatatgctgcccatatccgtggagccaagcaccagaaggtt
gtgaagcttcataccaaacttggtaagcccattccctctactgagcccagtatggtcact
cagacatcgtcctcaaccaccgctaccctcagcaagaccaccacagccaccctgagcagt
tccagcaccaccggctctctgtgtgtggctgcctcctcctcctcccctgccaccagccct
ccctacctgaaacccgtcaacatagtcagcagtggtgtggcaggtgtcaagaacccatta
gccaacagcctctctgctgccaactctgcctcagctgggaaaaaaatcaacacccccaag
atcaattttgttggtggaaatagattgcagaccacagtgaagatggaagaggccagagcg
gagaccaaagtggaggcttctaagcctgtgacgccctcttcaggtactcaggaccccaag
actgaagtttcggattctctgtccacatcagccctggctgcattgcagagtgacgtccag
cctgtgggtcatgactatgttgaggaagtccgaaacgatgaaggcaaagtcatccgcttc
cactgcaagctatgtgaatgtagtttcaatgatccaaatgcaaaggaaatgcatctaaaa
ggtcgtaggcatcgtctgcaatacaagaaaaaagtgaacccagatctgcaggtggaagtc
aagcccagcatccgagccagaaagattcaggaagagaagatgagaaagcaaatgcagaaa
gaggagtactggagaagaagagaggaggaggagcgctggagaatggagatgcggcgttat
gaagaagacatgtactggagacgtatggaggaggagcagcaccaccactgggatgaccga
cgtcgtataccagacggagggtatccacaggggcctcccggtctacttggagtccggcct
ggcatgcctggcctgcagcctcagggtcctttgcccccacgtcggcctgattcttcagat
gaccgctatgtcatgaccaagcatgcagccatctatccctcagaagatgagctgcagtct
atccagaagatcgtgtcaatcacagaacgtgccctcaaactggtctcggacataattaca
gaccaagacaaggccaaggaagaggacaaagagaagaaagaaccctctaaagacagagcc
ctgaagggagtgatgagggttggagtcctggccaaaggcttgcttcttcgtggggacaag
aatgtcaacctagtcctgctctgctctgagaagcccaccaagggcctcctcacctgcatt
gtggagcacctccctaaacaactaacaatggtaacaccagaaaaatatgaggtcaaggga
tctatccaggaagcggccatcattctgacatcctgtaccgagccaaagatgcaagtgaca
atcacactgacttcacctgtcatcagagaggaaaatggccgggatggagatgtaacctcg
ggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggct
gctctgcgccacgctaagtggttccaggctagagccaatggacttcagtcctgtgtgatc
atcatccgaatcctgcgagacctctgtcagcgagttcctacatggtcgcccttcccagga
tgggccatggagctgctggtggagaaggccatcagcagcgcgtctgcccccctcagccca
ggtgatgcactgagacgtgtcttcgaatgtatttcatctgggattttactccctggtggg
ccaggattggtagatccttgtgaaaagaagtctgtggataccctgacacctatgggagag
caacagagagaggacattacctcaagtgcccaatttgctctgaggctgctggcattccgt
cagatccataaagttttgggcatggaccctctgccgcagataaaccctcgcttcaacatc
cgcaacagccgcaagcgtcgccgtgacaacagtgatgggacagacagctttgagggtgaa
ggcaaaaaggacaagaaagattatgatagtttctaa
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