Siniperca chuatsi (mandarin fish): 122875967
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Entry
122875967 CDS
T08948
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122875967 (irx5a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122875967 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
122875967
NCBI-ProteinID:
XP_044051640
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All DBs
Position
LG1:complement(26246597..26250324)
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AA seq
457 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVVSKLKSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAYR
KNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLLNPGDIGCDRFKEEN
HGKDTDPLLSDSELKDQEERTTELLPDSAKPTTSSPSAVPRGNQTVAQQDKPSDLSHAPG
TVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDRCKGSGEAPQACPGLGQSAVMGTNASPS
RSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLNQTV
LNRAEALVRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttctctagccctgtattcatgc
cctgcttacagcaccagcgttatatcgggacccagaaccgaggaacttgggagatcctct
tcgggatctgcttttgcgccctatgccggatctactgcgttcaccagcgcctcgccaggc
tacaactcccacttgccatacagtgcagacgcggcggcagctgccacattcacctcgtac
gtggtgagtaaactaaagagttctccctatgaccacactacgggtatggccggctcaata
ggataccacccttacgcagcacccttgggcacctacccttatggtgacccagcataccgt
aaaaacgcaacccgggacgccactgccaccctgaaggcctggctcaacgagcaccgcaaa
aatccctaccccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctc
acccaggtgtccacctggttcgccaacgccaggaggaggctaaagaaggagaacaagatg
acctggaccccccggaaccggagcgaggacgaggaggaggacgagaatattgatttggag
aaaaacgacgacgacgagccaaacaagcccacagacaagggagactccacagacacagaa
gcagatcataaactgctgaacccaggggacataggctgtgacagatttaaagaggagaac
catggcaaagacaccgatccccttctgagcgactcggagttaaaagaccaggaggagcgg
actacagagttgctgccggattccgcaaaaccaaccacttcgtctccctcggcggtgccc
cgggggaaccagaccgttgcgcaacaagacaagccgtcagatttgagccatgcaccgggt
acggtgaccagcaacgtgacctctgttatccactcgcccccttcggcccctaaacccaaa
ctctggtcccttgcggagatcgccacgtcctcagacaggtgtaagggcagcggcgaggcg
ccacaggcttgccccgggttgggtcagagcgcagtaatgggcaccaacgcgtctccatca
cggtcctcccctcagtgcccgctccccaacagcacggtcctgtccaggcctctgtactac
acctcgcctttctaccccggctacacgaactatggtggcagttttggacatcttcacagt
aaccacggctcggtaaccacgggctccacggcacatttcaatggattaaaccagactgtg
ttaaatagagcagaggctttggtaagagagagccagaaagtcagaggccaaacgcaggta
gatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
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