Siniperca chuatsi (mandarin fish): 122875991
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Entry
122875991 CDS
T08948
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122875991 (lingo1b)
Membrane trafficking [BR:
schu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122875991 (lingo1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_RPS2
LRR_Zer-1
Ig_2
LRRNT
Ig_C17orf99
V-set
Ig_5
Motif
Other DBs
NCBI-GeneID:
122875991
NCBI-ProteinID:
XP_044051697
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All DBs
Position
LG1:complement(6850025..6866610)
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AA seq
623 aa
AA seq
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MTVLVSSRMVTGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNAQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNLASVPTDALSHLHNLLSLRLRYLNVTVIRDYSFKRLY
RLRVLDISHMPALDTMTQKSLFGLNLTSLSITNCNLTVIPYQAISHLRYLRFLNLSFNPI
LTVEGNQLFNLQKLQAFHLAGGRLAAIEPYSFRGLNHLRVLNISSNSLSTLEESVFHSVG
NLEILALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPEVVQGKEFKDFPDILPSDYF
ICQKSKIVDYKVQESHVDEGTTVHFACQAEGDPIPVIMWLSPKKEYITTKTVGSRLSVSN
EGTLEVRYSQIQDNGTYLCIASNAAGNDTKVAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEETEEASPTEAPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgactggggaggcaggagggcacagctacttg
gtggcgtgctggcagcccatcctgatcctgatgctgggcactgtcctttctggctccacc
actggttgtccctctcgatgtgactgcaatgctcaggagcgctcagttgtgtgccatcga
cggagactggcagctcttcctgagggaattcccactgaaacaaggctgctagatctcagc
aagaaccgtctgaaaactctggggcccgaggagttcattaattaccctcaactggaggag
ctgcaacttaacgaaaacacaatttcatccattgagcctggggcttttagcaaccttatg
aaccttcgtactctgggtttgcgcaacaaccagctaaagctcattcagctgggggtgttc
acaggcctgaccaacctcacccagctggatattagtgagaacaaaattgtcattctgctc
gactatatgttccaggagctgtacaacctgagggctctggaggttggtgacaatgaccta
gtattcatctcaccccgatcatttcatggcctcagcaaccttgaaagcctcaacattgag
ggatgcaatctggcctcagtgcccactgatgcccttagccatctgcataacctgttgtca
cttcgattacgctatctcaatgtcactgtcataagggattactcctttaagaggctgtat
cggctcagagtgctggatatttctcacatgcctgccctggacaccatgactcaaaaatcc
ttgtttggactcaacctcacatcattgtccatcacaaactgtaatcttactgtcatcccc
taccaagccatcagtcacctaagatatcttcggtttttgaatctgtctttcaatcccata
ctaactgtggaagggaaccaactgttcaatctacagaagctccaggcttttcatttggct
ggtgggagattagctgccattgagccctactctttccgaggactcaaccacctccgtgta
ctcaatatatccagcaatagcttgagcaccctggaggagtcggtcttccactcagtggga
aaccttgagatcctggctttgtatgacaacccgttggcctgcgactgtcgcttgctctgg
gtcttccgccggcggtggaggctcaactttaacagacaacagcccatgtgtgcttcaccc
gaggttgtgcaaggaaaagagttcaaggacttcccagacatcctcccttctgactacttt
atctgtcagaaatcaaagattgtggattataaggttcaagaaagccatgtagatgaagga
actacggttcattttgcttgccaagctgagggtgatccaatccctgtgataatgtggcta
tcccctaagaaagaatacatcaccaccaaaactgtggggtcaagactttctgtgtctaat
gagggcacattggaggtgcgttactcccaaatccaggataacggcacttacttgtgcatt
gcaagcaatgcagctggcaatgacaccaaagttgctcacctttttgtgcatagctactcc
cccaattggccccaccagccaaacaagacatttgccttcatttccaaccagcccagcgat
gaaggtgctaatgtgactcgggccacagttccatttccgtttgatgtaaagacacttatc
attgctaccaccatgggatttatctctttcctcggagttgtcctcttctgtcttgtaata
ttattcctctggagtagaggcaaagacaatactaagtcaagtatagaggttgaatacgtg
ccacgtaaagaggaaacagaggaggccagtccaactgaggcacccatacaattcaacatg
aaaatcatgtga
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