KEGG   Siniperca chuatsi (mandarin fish): 122876072
Entry
122876072         CDS       T08948                                 
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122876072 (nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:schu03021]
    122876072 (nelfb)
Transcription machinery [BR:schu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     122876072 (nelfb)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 122876072
NCBI-ProteinID: XP_044051896
LinkDB
Position
LG5:complement(5729336..5746438)
AA seq 589 aa
MIKQKRKMFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDL
HGTPRLEFHQSVFDELREKLTERVATIAEGKDEDRYGKLEELLEKSFPLVKMPSIQPVVM
QVLKHLPKVPEKKLKMVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEA
ALFSSDLSILHNFFSTSPKTRRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHY
CTLRAELLMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDGKRARELQGFLDGVKKGQ
EQVLGDLSMILCDPFACNTLVLSIMRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDM
IDSQVFKEPRLDLDVVTRFLPAMMSVVVDDHTFTVEQKLPSEEKSSLYPTTLPEAFNRYL
QENRVACEMGLYYVLHIAKLRNKNALQRLLPALVETYNDMAFGDIFLHLLTGHLTLLSDE
FGSEEFCSVVFDGFLLTSFSSKENVHRHTLRMLLHLHHKVLPSYMETLLKTLEPPKQSSE
PVKELYTQLTEKLDAQKKSPPPPDETPSLDLRLHPVTVPTTASTPTTPL
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgattaaacagaaacgaaaaatgttcgcggggctgcctgagctcgggatatccaacggc
gaggatcttaaagaaactctcaccaactgcacggagcctctgaaagccattgatcagttt
cagatggaaaatggcatcctgctgccgaccctccagtctgctcttcccttcctcgacctc
catggaacgcctcggctggagttccaccagtctgtctttgacgagcttcgagaaaagttg
acggagcgagtcgccaccattgcagagggcaaggacgaggacagatacgggaagcttgaa
gagctgctggagaagagctttccccttgtcaaaatgccgtccattcagccagtggtaatg
caggtgctgaagcatctacccaaggtaccagagaagaaactgaagatggtgatggctgac
aaggagctgtacaaggtgtgtgctgtggaggtgaaaaggcagatctggcaggacaaccag
gcactgtttggagatgaagtgtcacccctcctaaagcagtacattgtggagaaggaagca
gctctgttcagcagcgacctctccatcctgcacaatttcttcagcacttctcccaaaaca
agacgccaaggcgaggtggtcctaaagctgacccagatgattggaaagaacgtgaagctg
tatgacatggtgctgcagtttttacgaacactcttcctgcgaacgcgaaatgtccactac
tgcacgctgagagcagagctgctcatgtctcttcatgacctggacatcagtgagatctgc
tctgtagacccctgccataagttcacttggtgtttagatgcctgtatccgtgagaagttt
gtggatggcaagcgagccagagagctgcaaggtttcctggatggagtgaagaaaggacaa
gagcaagttcttggggacctgtccatgatcctgtgtgacccgtttgcttgtaacaccctg
gttctgagtattatgaggaaccttcaagagctgctgagtcaggacgctttacccagggac
agtccagacctgatgctgctgctgaggatgctgtcactgggtcaaggggcgtgggacatg
attgacagccaggtctttaaagagcctcgtttggatttggacgtggtgacccgcttcctg
cctgccatgatgtcagtggttgttgatgatcacacattcactgtagaacagaagcttccc
agtgaggagaagagttcgctataccccaccactctgccagaggccttcaacaggtatctg
caggagaacagggtggcctgtgaaatgggtctttactatgtcctccacattgccaaattg
aggaacaagaatgctttacagaggttactacctgccctggtggagacctacaatgacatg
gccttcggcgacatcttcctgcacctgctgactggacacctcaccctgctctctgatgag
tttggatcagaagagttttgttcagttgtttttgatggcttccttctgacttctttttcc
agtaaagagaacgtccacagacacaccctccggatgttgctgcatctacaccacaaagtg
ctgccatcatacatggaaaccttgctgaaaactcttgaacctccaaaacagagcagcgag
ccagtgaaggaactgtacacccagctgacggagaagctggacgcccagaagaagagccct
ccaccaccagatgaaactccatccctggatctgcggctgcacccagtgactgtccccacc
accgcctccacaccaaccacgcctctctga

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