Siniperca chuatsi (mandarin fish): 122876090
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Entry
122876090 CDS
T08948
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122876090 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122876090 (ppil2)
03110 Chaperones and folding catalysts [BR:
schu03110
]
122876090 (ppil2)
04121 Ubiquitin system [BR:
schu04121
]
122876090 (ppil2)
Enzymes [BR:
schu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122876090 (ppil2)
Spliceosome [BR:
schu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122876090 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
122876090 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
122876090 (ppil2)
Chaperones and folding catalysts [BR:
schu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122876090 (ppil2)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
U-box type E3
122876090 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
FOXO_KIX_bdg
Motif
Other DBs
NCBI-GeneID:
122876090
NCBI-ProteinID:
XP_044051925
LinkDB
All DBs
Position
LG5:4737261..4764580
Genome browser
AA seq
526 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTHFYGGKRAEIPQTNFRRLPFDHCSLSLQPFEYPVCTDEGVV
FDLLSIVPWIKKYGTNPTSGEKLEAKSLIKLNIAKNNDGKYHCPVLYNVFTNNSHIVANK
VTGNVFSYEAVEQLNIKTKSFKDLLTDEPFTRKDIITLQDPTNLDKFNVSNFFHVKNNLK
VLDPEEEKAKQQPGYHLKSTNLETRETLAELYKDYKGDQLLASTMKEPEAKKTDKLNAAH
YSTGRVSASFTSTAMTPATTHEAEAIADDTVRYQYVKKKGYVRLHTNKGDLNLELHCDKV
PKAGENFIRLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
AGRGILSMANSGPNTNKSQFFITFRSCIYLDRKHTVFGRIVGGFDTLTAMENVESDPKSD
KPKSEIKIISATVFVDPYEEADAQIATEREKEQQKQEEEKQQTSIALKKAKEEQAPKTFK
AGVGKYINPATIKRPAAEDESGPSTSGGAAAKKSKGKSSFGDFSSW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccaaaaagacaaaatgtacatcacatgttcagagtacacacat
ttttatggaggaaagcgagcagaaatcccacagacaaacttcagacggcttccatttgac
cactgcagcttgtcccttcagccgtttgagtatcctgtctgtactgacgagggagtcgtc
tttgacctgctgagcatcgtcccgtggatcaagaagtatggtactaatccgacctctgga
gagaaactggaagccaagtccctcatcaaacttaacattgccaagaacaacgatggaaag
tatcactgccctgttctgtacaatgtcttcacaaacaattctcacattgttgccaacaag
gtcaccggcaatgtgttttcttatgaggctgttgagcaactcaacattaagaccaaaagt
tttaaagatctgctgaccgacgaaccctttaccagaaaggacattataacactccaggac
cccacaaacctggataaattcaatgtttccaacttcttccatgtaaaaaacaacctaaag
gtgttggatccagaggaggaaaaggccaagcagcaaccggggtaccacctaaagagcacc
aatcttgagaccagggagaccttagctgagctgtacaaagactacaagggtgatcagctc
ctggcttccactatgaaggagccagaggccaagaagacagacaaattaaacgctgcccac
tactccacaggcagagtgtccgcctcctttacttccacggccatgactcctgcaacaaca
cacgaagcagaggccatcgcagatgacactgtgcgttaccagtatgtgaagaaaaaaggc
tacgtccgtctgcacacaaacaagggggacctgaatcttgagttgcactgtgataaggtt
cccaaagctggagagaatttcatccgtctgtgtaaaaaaggctactatgatgggacagtc
ttccacagatccatccggaatttcatgattcaaggaggcgaccccactggcaccggcaca
ggaggggaatctttctggggaaaacctttcaaggatgagtttcggcccaacctctcccat
gccggccgggggattctcagtatggccaactctggtcccaacaccaacaagtcccagttc
ttcatcacgttccggtcgtgcatctacctcgacaggaagcacacagtatttggaaggatt
gttggtggatttgacacacttacagccatggagaatgtggagagtgatcccaaatcagac
aaaccaaagtcggagatcaagatcataagtgcaactgtgttcgtggacccgtacgaagag
gctgacgctcagattgcaacagagcgagaaaaggagcagcagaagcaggaggaggagaaa
caacagaccagcatcgccctgaagaaagccaaggaggagcaggcgccaaaaaccttcaaa
gctggtgtggggaaatacatcaaccctgccacaataaaacgtccggctgctgaagatgaa
agcgggccgtccaccagcggaggagcagcggccaagaagtccaaaggcaagagcagcttc
ggagacttcagctcctggtag
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