Siniperca chuatsi (mandarin fish): 122876126
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Entry
122876126 CDS
T08948
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122876126 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122876126 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122876126 (usp30)
04121 Ubiquitin system [BR:
schu04121
]
122876126 (usp30)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122876126 (usp30)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122876126 (usp30)
Membrane trafficking [BR:
schu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
122876126 (usp30)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122876126 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
122876126
NCBI-ProteinID:
XP_044052018
LinkDB
All DBs
Position
LG5:complement(18453743..18460157)
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AA seq
505 aa
AA seq
DB search
MLWCRPESSDKLIGEFLGTGPIVRNKMMKNWGVIGGIAAAIAAGVYVLWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSGSPPVQSAKDNQLSTTLLQLLKAL
SSEEPGDEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDHQPKVTHLF
DMQSLESLPDQDEKTMTCRSRAPLHPIPSPWKFQHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPHWGRPISLDQCLQHFISSETIKEVECENCTKLQQGTTVNGQVLESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVLFTEYLSMDCYKHNASTQRSQRVK
CAPKPIKAENSDDSMEKPTTNGTDAEHRNNNNNPFSNGTCSSVFLRSPGVNPQLGLTYDY
SSTEYLFQLTAVLIHHGDMHSGHFVTYRRSPSSPRIPSPFSSQWLWVSDDSVRKASLHEV
LSSNAYMLFYERVRRLNLAVHSSEE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtgcagaccagaaagctctgataagcttattggggagttccttggcaccgga
cccatagtcagaaacaagatgatgaaaaactggggtgtcattggtgggatagctgctgcg
attgcagctggagtatacgttttgtggggcccaattactgagcgaaagaagagaaagaga
ggtatggttcctggcctgttgaacttaggcaacacctgcttcctgaactctttgcttcag
ggcttggcagcatgtccgtccttcatcaggtggctggagaagttttcaggttcgcctcca
gtccagtcagccaaagacaaccagctgtctacgacactgcttcagcttctcaaagctctg
tccagtgaggagcctggggacgaagatgtacttgatgccggatgtctcctggatgttctc
agactgtaccggtggcacatcagttcatttgaagagcaggatgcacatgaactttttcat
gtccttacgtcttctctggaggaggagcgggatcatcaacccaaagtcactcacttgttt
gacatgcagtcgctcgagagtctccctgatcaagatgagaaaactatgacctgcagaagt
cgagctcctcttcatccaataccaagtccttggaagtttcaacatccttttcatggtcgt
ttaacaagcaacatgtcatgcaagcgctgcgaacaacaaagtccggtgcggtatgactca
tttgagagcctctccctgtccatccctttacctcactggggtcgacctatctctctagat
cagtgtcttcagcatttcatctcctcagaaaccatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaagggacaacagtaaatgggcaagttttggaaagccagaggacaaca
tttgttaaacagctaaaactgggaaagctcccccagtgcctctgcatccatttacaaaga
ctgacgtggtccagtgaaggaacccccatcaaaagacaggagcatgtgctgttcacagag
tatctatcgatggactgctacaaacacaatgcttccacacagagaagtcagcgggtcaaa
tgtgctccaaagcccataaaggcagaaaactctgatgattccatggagaagcccactact
aatggcactgatgcagagcaccgtaacaacaacaacaaccctttttctaatggaacctgt
tcgtctgtatttcttcgctctcctggtgtgaacccacagctcggcctcacatatgactac
agttctacagagtaccttttccagctcacggctgtgctgattcaccacggtgacatgcac
tcaggacatttcgtcacataccgccgcagcccttcctcccctcgcatcccttcacccttc
agctcccagtggctttgggtgtcagacgactcggtacgaaaagccagcctgcacgaggtt
ctgtcttccaacgcttacatgctcttctacgagagagtccgaagactgaacctcgctgtg
cactcatcagaggagtaa
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