Siniperca chuatsi (mandarin fish): 122876189
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Entry
122876189 CDS
T08948
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122876189 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122876189 (si:dkey-3h3.3)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122876189 (si:dkey-3h3.3)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122876189 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
KH_DTX3L
zf-RING_4
zf-rbx1
zf-RING_10
zf-C3HC4_3
zf-RING_11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122876189
NCBI-ProteinID:
XP_044052148
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All DBs
Position
LG5:complement(31894037..31908196)
Genome browser
AA seq
483 aa
AA seq
DB search
MLFPWSPTEVAKGHVLSTEALELKVKASSSQVFTVSPETTACCCTLEELCRMEFITDITI
IIDGADFKDPGRLMEILQSYSPEKKAACYRVRGTYEELENLSFRLSAARLHSSPATHALT
CQHDELASAHVKSVDVSGVVMAYIEQKCAKELSKIQGNNFVFETQPDLSTVHDKPNSTVR
VTFRPRHASVNPVHADFVRQRFITFYQRTASDLQVTSVPVSPHDHEDLQRRFPHLLFKTS
DNKYELTSTGPFVHIAKLKEFLLQNTPSSSKSPVNKGPADTPSSRTSGPSSTHSKDPKNE
SCPICMEPIVTTEKETLRCKHSFCRNCLKTAFDYKPVCPTCGEVYGILTGTQPDGGRMNA
TKTSSSLPGYEKYGTIMIHYYIPSGIQKEEHPNPGQPYEGVSRTAYLPDSSEGRGILKLL
MRAFDQRLIFTVGQSTTSGRNNTVTWNDIHHKTSTHGGPTHYGYPDPDYLSRVRDELKVK
GIE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgttatttccttggtccccgacagaggtcgctaaagggcacgtgctgagcacggaggcc
ctggagctgaaagtgaaagcaagcagcagccaggtcttcactgtgtccccagaaacaaca
gcgtgctgctgcactttagaagaactctgcagaatggagtttatcacagacatcactatc
atcattgatggagctgatttcaaagaccctggaaggttaatggagattcttcagtcttac
agtcctgagaaaaaagctgcctgctacagagtgagaggaacctacgaggagctggagaac
ctttctttcagactgtcagcagcgcggcttcactccagtccagccacacatgcactaacc
tgtcagcacgatgaacttgcttcagctcatgtcaaatctgtggatgtatctggggttgtt
atggcctacattgagcaaaaatgtgcaaaagaacttagcaaaatccaaggcaacaatttt
gtctttgaaacacagcctgacctcagtacagtacacgataaacccaacagcacagtacgc
gtgactttcagaccacgccatgcctccgtaaatcctgttcatgctgactttgtcagacag
cgattcatcacattctaccagagaactgcctccgacctgcaggtcacatctgtccctgtg
agtccacatgaccacgaagacctgcagaggagatttccacacctcctttttaaaaccagc
gacaacaaatatgaattaacatcgaccgggccttttgtgcacattgctaaattgaaagag
ttccttttacaaaatacgccaagctcaagcaagagtccagtgaacaaaggtccagcagac
actccaagcagcagaacctcaggtccttcatctacacacagcaaagatcctaaaaatgaa
tcatgtccaatctgtatggaaccaatagtaacaacagagaaagagactctgcgctgcaag
cactcgttctgcagaaactgcctaaaaacagcctttgactacaaacctgtatgcccgaca
tgtggagaggtatacggcattctgactgggacacaacctgacggaggcagaatgaatgcc
accaaaacctcttcatctttgcctggatatgagaaatatggaacaataatgatccattat
tacattccaagtggcatccaaaaggaggagcatcctaacccgggtcagccatatgaaggt
gtatcccgtacagcctatctcccagactcctcagagggcagagggatcctgaagctgctg
atgcgagcctttgatcagagactcatcttcactgttggtcagtccaccaccagtggcagg
aacaatacagtcacatggaatgatattcaccacaaaacctcaacacatggaggaccaact
cactatggatacccagatcccgattatctcagccgagttcgagatgaactgaaagtcaag
ggaattgaatga
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