Siniperca chuatsi (mandarin fish): 122876270
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Entry
122876270 CDS
T08948
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122876270 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122876270 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122876270 (clip1a)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122876270 (clip1a)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
122876270 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
CCDC39
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
122876270
NCBI-ProteinID:
XP_044052284
LinkDB
All DBs
Position
LG5:19426959..19453681
Genome browser
AA seq
2235 aa
AA seq
DB search
MSTAKPSGIKVPSKIAKPSGTAAPKTNTSTAGAKVAVADKSAASASGGDAEGAGENFQIG
ERVWVNGNKPGYIQFLGEAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTRP
SKLSRTEGEANGTQTAPPSRAASPTPSVGSVASHTPTTKSTLPSTTMAAKKASSTTPATP
ATPSSNLARTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEW
CGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKVVAT
PSGLKRSPSASSISTMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQH
IEQLMAERDMERAEVAKATGHVGEMEQEMRLLRDDQEQMEAKMDQLRALVEAADKDKVEL
LNQLEEERRKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQREL
EDTRVATVSERSRIMELERDLSLRTREVADLQLRLGTQHGSEGSNSTLSPLLEEINSLRD
QLASQEAKQQEELVKYKEKLEAQEKTHTEAVAQLQATLVRLSGENEQMQMRLSQAEKENA
DSIELWRSKLESAAASHQQAMDELKVSFSKGAGAQTEELIETKSALERLKLEHKLALEEA
GAKHEANATVWTQEMQALKAQLLSLTEDKERLEESLRFSVEKAEEQHLVEMEDVLGKLHA
AELRVKELEEKEAMLAQQAQDKDGENKKQMAELVALRSQVAQGNQELVTLKSQLEVVKSQ
GNNQGAKVSELNSQLEGRQQEVLSLQQSLTTVQQEKDTLEQALGGLKQKLSESTEEQTKS
AKTMQETLEKLSKKEEQCTSLTTESESLRTQLAGLERKLKAADEKLEQLSKDKSKLENDI
SDMMKASGDSSVQLTKMNEDLMQKERRLEELQSQLVEEKEKVAHFNEQLQQEQSRKEQEL
KETRDTHQSQISSLQEKIVNLEKTVKQGETLVEELKASQEKSFSQASELHAKELEVLQSQ
VDKLKQELSSSTDKTQELEKLVSELQPYKEQAQCLSSELDSYKHDVEHLSKKLEKQSLDL
ENLCKESADVKVEKCKLEKRLSDLQTKLSAFEISHQELSVQNEELLITRDIFSKNQEELL
ANKKCSDEERTSLNEELEKLRGLLQEVQTENQNLKHAKGEHQAQIEELQRQNAEKNDLLL
KHQQDIQQIEAKKKQLLEDYENVCKERIRLEDDLNESRSMLTCEKDNLILERDAARNAKK
SLDAKNAELQAKLKSLNLEKEDLTMKNTQLQSLTDTLTKEKVEMSSEVSAAVLDKKSLET
VKEELQNKLSVTKKDLENSVRECEELKASKMSLAQMLEEFKTSSQVTDSERLHLLQEKED
LLAIQRKVCNEKEELLREIEELKEKLQVSTVQLSQSNEKFKEALSSFEQEKQAFHLQNSE
TEMALHALRKEKMSLDSALEQQKMDYERLVGEKGELEEKHTKAVSEKNALSLERDKLASD
NRTTKDQLDSYSRDNAVFIQEKSHLTTMLEETKRQKDEIEAEMTSLKREKAELQNELQKR
NSDIEILEKGKTELVKEHSKLKMDFEKGNLEFVQKIDNLTKDCQRLQSLQTEADKKAQSL
QKENQGLLQEIQELKCQTESMSEAKHVLETQLQAESSERNIAISDKDGLSKQIEELQKTL
SKVTQENKEISSNLKNADEQKKSFMVDMEALKTRLKQQEQETSQLAEDKEQLLSKLEEMG
KQMTSLTTEKEDLLTGRCKLEQDISSLRTSQENSLVERSRLLGELEKLHANQKQLEVDVK
GLQTDLEKQFQNAAAVKEELSSSISNLTAQKDALQVERDEAAQQVRQLESQLKNAISKQL
EASEASGKSAEVLEQLTKERASLMQEKNEAQFLLVELQSSKQEVETQLKKLKEENSKYQE
VLNVSKEQLCTETQRTKSLCQEIEELKEAVSVKTQSLQMLQDENNKLTQELDNSHKGQSD
LVKLKDEHSKLKKHLKELKQSLPNNALSESTLKEQFDKEKAALKQSIHKNSALISEKDQQ
VEHLRSELAVLRGESASVKTLQGTIQALEQDKANLQERVQRLEKDLAAGPDTINTSSGDA
VLDQLREDKETAESQAAIEFLNSVIVDLQRKNRELKDKLETMAAAALNGNNQNELDNYDS
HDKEPVKKKPPPRLFCDICDCFDLHDTEDCPTQMQMPDSPPHTTYHGNKGEERPYCDICE
VFGHWTESCNDDQTF
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccaagcccagtgggatcaaagtgcccagcaagatagctaagccatctggg
acagcagcccccaagaccaacaccagcacagcgggagctaaagttgctgtggccgacaaa
tcagctgcaagtgccagtggaggagatgccgagggtgctggggagaacttccagattggg
gagcgagtatgggtgaatgggaataagccaggctacatacagtttttgggagaggcacag
tttgccccaggacagtgggcagggattgttctagatgagccaattgggaagaatgacggg
tcagtggcaggggtgcgctacttccagtgtgaagccctgcgaggaatatttacccgccca
tccaagttgtctcgtacagaaggggaggctaatggaactcagaccgcaccaccctcccgc
gctgcatcacccactccttcagtcggtagcgtagcctcgcatacacccaccacaaaatca
acattaccctcaactaccatggcagccaagaaggcctcctccactacgccagctacgcca
gctacaccatcttccaaccttgcacgtacgaacagtgaatctgtctccaacctctcagag
actggatcagtcaagaagggcgaaagggaactgaagatgggtgaccgtgtattggttggt
ggtacaaaggcaggagtggtacgtttccttggagaaacagattttgccaaaggcgagtgg
tgtggtgtggaattggatgagcccttaggaaagaatgacggggcagtggcaggcacaaga
tattttcagtgccaacccaagtatggcttatttgctccagtgcacaaagtcacacgcatt
ggcttcccttcaaccacgccagccaaagcaaaaacaacagttcggaaagtagtggccaca
ccatcaggactaaagcgaagccctagtgcctcctccatcagtaccatgagctctgtggca
tcctctgtcagcgccaagcccagccgcacaggcctgctaacagagacatcatcacggtat
aatcgtaagatttcaggcaccacagccctacaggaggcgctgaaggagaagcagcagcat
attgagcagctgatggctgagagggacatggagagagctgaggttgccaaggctactggc
catgttggagagatggagcaagaaatgagactgctcagggatgatcaggagcagatggag
gctaagatggaccagttacgtgccttggtagaagctgcagacaaagacaaagtcgagctg
ctgaatcagctggaggaggagcgtaggaaggtggaggaccttcagttccgtgtagaggaa
gcttgcattaccaaaggagacctggagacgcagaccagactggagcatgcccacattaag
gagcttgaacagagcctgctctttgaaaagaccaaagctgagaaactccaaagagagtta
gaagacactagggttgctactgtgtcggaaagatcccgtattatggagcttgagagggac
ctttcactgcgaacaagagaggtagctgacctgcagctgcgtcttgggacccagcacggc
tctgagggctcaaactccactctttctccccttctggaagagataaactcgctgagggat
cagttggcttctcaagaagctaagcagcaagaagagctggtgaaatacaaggagaagtta
gaagctcaagaaaagacccacactgaggcagttgcccagcttcaggctacattggtaagg
ctctctggtgagaacgagcaaatgcagatgcgcttaagccaggctgagaaggagaatgct
gacagtattgaactctggcgttccaagttggagtctgccgctgcctctcaccagcaggcc
atggatgagctgaaggtgtccttcagcaaaggcgcaggtgcccagacagaagaacttata
gaaaccaaaagtgcactagagaggctgaagttagagcacaagttggctctagaggaggct
ggagccaaacatgaagctaatgccacagtttggactcaggagatgcaggcactaaaggca
caactgttgtctttgactgaggacaaggagcgactggaggagtcactacggttcagcgtt
gaaaaagcagaggagcagcaccttgtggagatggaggatgttcttggaaagcttcatgct
gccgaacttagggtaaaggagcttgaggagaaagaagcaatgttggcacaacaagcccaa
gacaaggatggagaaaacaaaaagcagatggcagaacttgtggctctgcgcagccaagta
gcacaaggtaaccaggagcttgtgaccttgaagagtcaattagaggtggttaagagccaa
ggaaacaaccagggtgccaaggttagtgaattgaactctcagttggagggccgacagcag
gaagtcctctctttacagcagagtctgaccactgtacagcaggaaaaagacaccctggaa
caggcgcttggaggcctgaaacaaaagttgtctgaaagcacagaggagcagacaaaatca
gcaaaaactatgcaagaaacacttgagaagctcagtaagaaggaagagcagtgcacatcc
ctgaccacagagtcagagtctctaagaactcaacttgccgggctcgagagaaagctgaag
gctgcagatgaaaagcttgagcagctttcaaaggacaaaagcaagttggaaaatgatatt
tcagacatgatgaaggcatctggtgatagttcagtacagctgaccaaaatgaatgaagac
ctcatgcagaaagaaaggaggcttgaggagttacagagtcaactagtagaggagaaagag
aaggtggcacacttcaatgaacaactccagcaggaacagtcccgcaaagagcaggagctg
aaagagaccagagatacacatcagtctcaaataagtagccttcaggagaagattgttaac
ttggagaagactgttaaacagggtgagaccctggttgaggagctaaaggcctcacaagag
aaatccttctctcaggcctcagagctccacgcgaaggaacttgaggtgctccagagtcag
gttgacaagttgaagcaagagctctcctcctccacggacaaaacccaggagctggagaag
ttggtgtctgagctgcagccatacaaagaacaggctcagtgtctttcttctgagcttgac
tcctacaagcatgatgttgaacatttgtccaaaaaactggaaaagcagagtctagatctg
gaaaatttgtgtaaagaaagtgcggatgttaaggttgagaaatgcaaactggagaaacgg
ctttcagatttgcagactaagctctctgcttttgagattagtcatcaggagctttcagtc
cagaatgaagaactgctaataaccagagatatattttcaaaaaatcaagaggaactactg
gctaacaagaagtgctcagatgaagaaaggacttcattgaacgaggagttggagaagctc
agaggtcttcttcaggaagtacagactgaaaaccaaaacctgaagcatgctaaaggtgaa
catcaggcccaaattgaggagcttcaaagacaaaatgcagagaagaatgacctgctccta
aagcatcagcaggacatccagcaaattgaggctaaaaagaagcaactacttgaggattat
gaaaatgtctgcaaagagaggatccgacttgaagacgacctcaatgaaagcaggtcaatg
ctcacatgtgagaaggacaatctaattttagagagagatgctgctagaaatgccaaaaaa
tctcttgatgctaagaatgctgagttgcaggcaaaacttaagtccttgaacttagaaaaa
gaagatcttacaatgaagaatacccagctgcagtccctcacggatacactgacaaaagag
aaggtggagatgtcttctgaagtcagtgctgctgtgttggataaaaagagccttgagaca
gtgaaggaggagctccagaacaagctcagtgtcacaaagaaagacttagagaactctgtc
cgtgaatgtgaagaacttaaagcctcaaaaatgagcctggcccagatgctggaagagttc
aagacaagcagtcaggtgactgattctgagaggcttcaccttctgcaggagaaagaagac
ttacttgcgatccaaagaaaagtctgtaatgagaaggaagagcttctcagagagatagaa
gaattaaaggagaagcttcaagtttcaacagtacaactgtctcagtccaacgagaaattt
aaagaagcgttatcatcttttgagcaagagaagcaagcatttcaccttcagaattctgaa
actgagatggctctacatgctttacgaaaagaaaagatgagcttggattcagcactagag
cagcagaaaatggattatgagcgtttggtaggggagaagggagaattagaagagaagcac
acaaaagccgtatctgagaaaaacgctctttctctagagcgtgataagctagctagtgat
aaccgaacaactaaggaccagttggacagttactccagagataatgccgtctttattcaa
gagaagtctcatttaacaacaatgctagaggaaaccaaacggcaaaaagacgagattgaa
gcagagatgacctctttgaaacgagaaaaggctgaactacaaaatgaactgcagaagcgt
aactctgatattgaaattcttgaaaagggcaaaactgaacttgttaaagagcatagtaaa
ctaaagatggattttgagaagggtaatttagaatttgttcaaaagattgataaccttact
aaagattgtcagcgtctgcaatcgttgcagactgaggctgacaaaaaagcgcagtccttg
cagaaagagaaccagggcttgcttcaggagatccaggagttaaaatgtcagactgaatca
atgtcagaggctaagcacgttcttgagacccagctacaggctgaatccagtgaacggaat
atagcgatatctgacaaggatggtctttccaaacaaattgaggagctgcagaaaacattg
tccaaagttacacaagaaaataaagaaatttcttctaaccttaagaatgctgatgagcaa
aagaagtcttttatggtggatatggaggctttgaaaacacgattaaagcagcaagagcaa
gaaactagtcagttggcagaagataaagaacagctattatctaagcttgaggagatgggc
aaacagatgacctccctgaccacagagaaggaggaccttttaactggacggtgtaaattg
gagcaggacatttcttctctccgcacaagccaagaaaattcgcttgtagaacggtcaaga
ctccttggagagttagagaagttgcacgctaaccagaaacaactagaggttgatgtcaag
ggcctacaaactgatttggaaaagcaattccagaatgctgccgctgtgaaagaagagctt
tcctccagcatctcaaatctaacagctcagaaggatgccctgcaggtggagagggatgaa
gccgcccagcaagtcaggcagctcgagtcccaactaaaaaatgccatttctaagcagctt
gaggcttcagaggcctctggcaagagtgctgaggttctcgaacagctgacaaaagagaga
gccagtttgatgcaggagaagaacgaagctcaatttttactggtagagctccaaagctcc
aagcaggaggtggagacccagctaaaaaaattgaaggaagagaattccaagtaccaagaa
gttctgaatgtatccaaagagcagctttgcacagaaacccagaggactaagagtctgtgc
caggaaattgaggagcttaaagaagcagtttctgtgaagacacagtccctgcagatgctg
caagatgagaacaacaagctgactcaggagcttgataacagtcacaaaggccagagtgat
cttgtgaagctcaaggatgagcactcaaaactcaaaaaacacttgaaggagttgaagcaa
agcctgcccaataatgccttgagtgagagcaccttgaaggagcagtttgataaggagaag
gccgccctcaaacagtccatccataaaaacagtgccttaatttcagaaaaggaccagcag
gtggaacacctgaggagcgagctggctgtactgcgtggggaaagtgcctcagttaaaaca
ctgcagggtacaattcaggccttggagcaggacaaggctaatctacaggagcgtgttcag
agactggagaaggacctggctgcagggcctgacaccatcaacacgtcctcaggtgatgca
gttttggaccaactaagggaggataaggagactgcagagagtcaggcagcgattgagttc
ctgaattcagtcattgttgacctccagaggaagaacagggaactcaaggacaaattggag
acaatggcagctgctgctctcaatgggaataatcaaaatgagctggataactatgatagc
catgacaaggaacctgtgaagaagaagcctcccccaaggctgttctgtgacatctgtgac
tgcttcgacctccatgacaccgaggactgtcccacacaaatgcagatgcccgactcccct
ccacacaccacctaccatggcaataagggcgaagagcggccctactgcgacatctgtgag
gtctttggccactggaccgaatcctgtaatgatgaccagaccttttga
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integrated database retrieval system
