Siniperca chuatsi (mandarin fish): 122876277
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Entry
122876277 CDS
T08948
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
schu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122876277 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
122876277 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122876277 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122876277 (gtf2h3)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122876277 (gtf2h3)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122876277 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
122876277
NCBI-ProteinID:
XP_044052304
LinkDB
All DBs
Position
LG5:complement(19511033..19515692)
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AA seq
300 aa
AA seq
DB search
MASEEEINLLVIVVDVNPIWWGQQAQREPEFTLSKCLDAVMVMGNSHLAMTRTNMLAVVA
SHCQDSHFLYPSKSWRGGDSGGDDASSSGDGKYELLSVANNLIAEEIRNVMSKTEVRGNS
TDTLLAGSLAKALCYIHRVSKELEVGQEIKSRILVIKAAEDCALQYMNFMNVIFASQKQN
VLIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAY
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKPST
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaggaggaaatcaatctgctggtcatcgtcgtggatgtaaatccgatatgg
tgggggcagcaagctcaacgtgagccagagttcaccctgtcaaagtgtctggatgcagtc
atggtgatggggaactcccacctggccatgaccaggacaaacatgctggctgtcgtcgct
agccactgtcaggacagtcacttcctgtatcccagtaagagctggagaggcggggacagc
ggtggggacgatgcatcctccagcggggatggaaaatatgaactcctgtcagtcgccaat
aatcttattgctgaagagatcaggaatgttatgtcaaaaactgaagtgagaggaaattca
actgatactttgttggctggatcccttgccaaagcactttgctatattcacagggtctca
aaagagctggaagttggacaggagataaaatcaagaatattggtgataaaagcagccgag
gactgtgccctccagtacatgaacttcatgaatgtaatttttgcttcccagaagcagaac
gtcctgatagatgcctgtgtgttggactcagactcaggtctccttcagcaggcttgtgat
ataactggaggattatacctcaagataccacagaaagttgccctggcacaataccttttg
tgggtgttcctgccggactctgagcagcgttcacagctggtgctgccaccacctgcatat
gtggactacagagctgcatgtttctgccatcgtaacctcattgagattggttatgtgtgc
tcagtttgtctgtcaatattctgcaacttcagccccatctgtacaacttgcgagactgcc
ttcaaaatccaactaccacagatggtcaagcccaagaagaagaaactcaagccatctaca
tga
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