Siniperca chuatsi (mandarin fish): 122876300
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Entry
122876300 CDS
T08948
Symbol
nr5a1a
Name
(RefSeq) steroidogenic factor 1a isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122876300 (nr5a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122876300 (nr5a1a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
122876300 (nr5a1a)
Nuclear receptors [BR:
schu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
122876300 (nr5a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122876300
NCBI-ProteinID:
XP_044052369
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All DBs
Position
LG5:complement(6290777..6313664)
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AA seq
486 aa
AA seq
DB search
MLGDKAHGVTLKVMEYTYDDDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRY
TCAENQECKIDKTQRKRCPFCRFQKCLSVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQ
QKKALIRSNGLKLESAAPPPASPLQTDYGFTGTLHSLPTISKSLLPSTPSSITPTDYEAN
LYGPPSLGMAMQSHVPLTTQYQYTAFPGRAIKAECPDYTSSPESLTGYPYPDMYPSASPQ
PPSLPPLVLELLRCDPDELMVQNKIVAHLQQEQSGRGRLDKPSTFSLMCRMTDQTLFSIV
EWARSCIFFKELRVGDQMKLLHNCWSELLVLDHIFRQVQHGQEDSILLVTGQEVELSFIL
SQAEATLSSLVQRGQELAARLRALQVDRREIACLKFLLLFNPNVKLLEDQAFVEGVQEQV
NGALLEYTLSTYPQFQEKFSQLVVRLPELRSLSTQAEDYLCYMHLSGEVPCNNLLIEMLH
AKRACV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagacaaggctcacggtgtgactttgaaggttatggaatacacatatgatgat
gacctggaagagctgtgtcctgtgtgcggagacaaggtgtctggataccactacggtctg
ctcacctgcgagagctgcaagggattcttcaagaggacagtgcagaacaacaagaggtac
acatgtgcggaaaaccaggagtgtaaaatagacaaaacccagaggaagagatgtcctttc
tgtcgcttccaaaagtgcctcagcgtcgggatgcggctagaagcggtgcgcgcagaccgc
atgcgtggggggaggaataaatttggccccatgtacaagagagacagggccttgaagcag
cagaagaaggctttgatacgatccaacgggctcaagctggagagcgcagctcctccgccg
gcctctcctctgcagactgactacggcttcaccggcaccctgcacagcctgcccaccatc
tccaaaagtctactcccctccaccccgagctccatcaccccaacagactacgaggccaac
ctctatggacccccatccctgggcatggccatgcagtcccacgtgcccctcaccactcag
taccagtacacagccttccccggcagggcaattaaagcagagtgtcccgactacaccagc
tccccggaatctctgacaggatacccctacccagacatgtacccctcagcctcgccgcag
ccgcccagcctgccgccgctggtgctggagctgctgcgctgcgatccagatgagctgatg
gtgcagaataagatcgttgctcatctgcagcaggagcagagcggccggggccggctggac
aagcccagcaccttcagcctcatgtgtcgcatgacagaccagactctcttctccatagtg
gagtgggctcggagctgcatcttcttcaaggagctcagggtgggagatcaaatgaagctg
ctccataactgctggtctgaacttctggtcctggatcacattttcagacaagtgcaacat
ggacaggaagacagtatcctgctggtgaccggccaggaggtcgagctgtcgttcatcctg
tcccaagctgaggcgactctgtccagtctggtccagagaggtcaggagctggcggcgagg
ctgcgggcgctgcaggtggaccgcagagagatcgcctgtctgaaattcctcctcctgttc
aaccccaatgtgaagctgctggaggaccaggcattcgtggagggcgtccaggagcaggtg
aatggggctctgctggagtacaccctgtccacctaccctcagttccaggaaaagttcagc
cagctggtggtgcggctgccggagctgcgctccctaagcacgcaggccgaggactacctg
tgttacatgcatctgagcggagaggtgccctgcaacaacctgctcattgagatgctgcat
gccaagcgagcgtgtgtgtga
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