Siniperca chuatsi (mandarin fish): 122876324
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Entry
122876324 CDS
T08948
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122876324 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122876324 (msi1b)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122876324 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
PHM7_cyt
NID
Motif
Other DBs
NCBI-GeneID:
122876324
NCBI-ProteinID:
XP_044052458
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Position
LG5:11035010..11055396
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AA seq
430 aa
AA seq
DB search
MREGQQRGLSGGGGGVCPSLHLARSPFCHPGPNPPSSSHSLSACSPARLGSARTHAALTH
AQRGHGMETEGSQSSLSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRD
PVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVG
GLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEI
NNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIVLNPCVMCTAESETEDKDSY
PGFQTATYTSRSYAGITPGYTYQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAA
AAVVRGSNPSRSAGFLGTSSPGPMADLYGTASQESAVSSYLSAASPAPSTGFSHSLGGPL
IATAFTNGYH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagagagggacagcaacggggactgagtggaggaggaggtggagtctgtcccagcctg
catctggcccgctcccctttctgtcaccccgggccaaacccgcccagttcttctcactca
ctctccgcctgttctcccgcacggctcggctcggctcggacacacgcagcactcactcac
gcacaacgaggacacggaatggagacggaagggagccagagcagcctgtccaccacggac
tcccctcacgatccctgcaaaatgttcataggtggactcagctggcaaacaacacaagag
ggtttgaaggagtacttctgcaagtacggcgaggtgaaggagtgtatggtgatgcgagat
ccggttactaagcgctcgagagggtttggattcgtcacctttgttgatcaggccggcgtg
gataaagttttggcccaaaccaggcacgagttggactcaaaaacaatcgatccaaaggtt
gcattccctcgcagagctcagcccaagttagtgactcgaaccaagaagatctttgtggga
ggcctgtcagtgaacacaaccatcgaggatgtgaaacagtactttgaccagtttgggaag
gtcgacgatgccatgctcatgttcgacaagaccaccaacagacacagagggtttggattt
gtgacatttgagaacgaggatgtggtggagaaagtctgcgagatccacttccacgagatc
aacaataaaatggtggagtgtaagaaagctcagcccaaggaggtgatgtcccccacgggc
tcagccagggggcgctctcgtgtgatgccctatggaatggacgccttcatgctgggcatt
gttctaaatccctgtgtaatgtgcactgctgagagtgaaacagaagacaaagacagttat
ccaggcttccagacagccacttacaccagtcggagctatgctggcatcactcctggatat
acctaccagttccctgagttccacttagagaggactccccttctgacttcaccccacccc
cctgagctcacagccattcctctcacagcatatggaccaatggcagcagcagcggcagca
gcagcagtagttagaggctccaacccgtctcgctcagctggatttttaggtacaagcagc
ccaggaccgatggcagacctttatggaacagccagtcaggagtcggctgtcagcagttac
ctcagcgctgcaagccctgccccaagcactggattcagccatagtttggggggccctttg
atcgccacggccttcactaacggctaccactga
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