Siniperca chuatsi (mandarin fish): 122876360
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Entry
122876360 CDS
T08948
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122876360 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122876360 (zgc:65851)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122876360 (zgc:65851)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
122876360 (zgc:65851)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
BCDHK_Adom3
DUF2594
Motif
Other DBs
NCBI-GeneID:
122876360
NCBI-ProteinID:
XP_044052541
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All DBs
Position
LG5:complement(9028580..9035283)
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AA seq
513 aa
AA seq
DB search
MSYSSDIYSSSSYRKIFGDAPRSGRVGLGSSSSPSRLHSAGYRNTHRTYGSPSVMSSTTY
RRTAAPGRVYSSMPDSMMDLTQSTAVTNELKIIRTNEKEQLQGLNDRFVSFIEKVHNLEQ
QNKVLEAEVTLLRQRNNEPSRLHELYEQEIRELRARVEELTHEKSQMHLDCVQMNDTLER
VREKLEEETRLRGEAENTLKGYRKDVDDATMARLELEKKVESLESSGGAQSCRRPQATSS
SRVSVEMDMSKPDLTAALKDIRAQYENLSARNQAQAEDWYRSKFASVTEAAARNQDSIKH
SKEELSEYRRQVQARTLEIEALRGHNEALERQIAEMEDRHNNEIGEMQDTIQQLEAALRS
TKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSIGGAMVQSGYPGLSYMSA
RTYSLGAYRKFGAKPEEEEEEAEEEEEGEGEENKEEGEEGEEGEEGDGQEEGEGEEEGEE
EEEEEEEEEEEKLKEKEKEKEKKESPTGKNSKS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccagcgacatttacagcagcagctcctatcggaagatcttcggagatgcc
ccccggtccggccgcgtgggtctgggcagcagcagcagcccgtcccgcctgcactctgcg
ggataccgcaacacccaccgcacctatggttccccctccgtgatgtcctctactacctac
cgcaggacagcggcgcccggccgcgtctactcctccatgccggactccatgatggacctg
acccagtccaccgcggtcaccaacgagctcaagatcatccgcaccaacgagaaggagcag
ctgcagggcctcaatgaccggttcgtgtccttcattgagaaagtgcacaacctggagcag
cagaataaagtcctggaggcagaggtcacgctgctgcggcagcgcaacaacgagccctcg
cgcctgcacgagctgtacgagcaggagatccgcgagctgcgggcgcgcgtggaagagctg
acgcacgagaagagccagatgcacctcgactgcgtgcagatgaacgacacgctggagcga
gtgagggagaagctggaggaggagaccaggctgcgcggggaggcggagaacaccctgaag
ggctatcggaaggacgtggacgacgccaccatggcgcgcctggagctggagaagaaagtg
gagtctctggaaagttctggaggagcgcagagctgcaggcgtcctcaggccacaagttca
tcccgagtgtcagtggagatggacatgagcaaaccggaccttactgctgccctgaaggac
atccgggctcagtatgagaacctgtcggccaggaaccaggcccaggcagaggattggtac
cgctccaagtttgccagcgtgaccgaggcggctgcccgcaaccaggactccatcaagcac
tcgaaggaagagctgagtgagtaccgcaggcaggtgcaggcccgcaccctggagatcgag
gccctcaggggccacaatgaggccctggagaggcagattgccgagatggaggatcgccat
aacaatgaaatcggagagatgcaggataccattcagcagctggaggctgccctgcgcagc
accaaaggagaaatgtcccgtcacctgcgtgaataccaggacctgctgaacgtcaagatg
gcgctggacattgagatcgctgcctacaggaagctgctggaaggcgaggagtgtcgcctc
agctccattggcggcgccatggtccagtccggctacccaggcttgtcctacatgtcagcc
cgcacctactcccttggagcctacaggaagtttggagccaagcctgaggaggaggaagag
gaggcggaagaagaggaggagggcgagggagaggagaacaaggaggagggcgaggaggga
gaagagggagaggagggagatggccaggaggagggtgagggagaggaggagggagaggag
gaggaagaggaggaggaggaggaggaggaggagaagctgaaagagaaggagaaggagaag
gagaagaaggagagccccaccggcaagaacagcaagagctaa
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