Siniperca chuatsi (mandarin fish): 122876373
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Entry
122876373 CDS
T08948
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122876373 (smarcad1a)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122876373 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
122876373
NCBI-ProteinID:
XP_044052564
LinkDB
All DBs
Position
LG5:21845460..21860569
Genome browser
AA seq
1069 aa
AA seq
DB search
MSLFNLDRFRFDKKAATTTTTNKDEDSGSKSPESEKENKPAQMKAVKPPPKSHARGVVFE
EVLTIDLEEDETKTKISLTRKSKNPIGKSSKNLESDHTDDEDNELEEKMNRLLEMFPQLP
RTELLEVIGSTSTLDGAVAACLLKFGDKEAPDQGRKRKQDGSSSSQDSGEIQPSKKRRQS
VVSGEEDNEGKEPSWEKQEAMVRRLQKKFPDQDKEELRMVLQEHDWNVEDALQVLQMFSD
PDNTSFSSPETEEKKSSKSKSKDKSSRDHRKLKRHKDHGDSKNRKDRKDSKYHRNISETE
EDSIDDTDATKDSEEDSDSEDSDGSKNRSSTSILSSWLKKRSDSVSSSSSVKKTTTSSSL
KPSSSSSTAQMLSRFASGTSIAKKQAAERKRKARASDEHVSSEGENNDEEDTVSSEFEDS
DEELDSKGGMTDLKKEILKFFQDASIDELSLIAGCSVKKAQKIVELRPFDSWQSLVDVFH
KDNGLSEDLLLGCRVVLKERNVVQGLMSKCETISSKMVKQVTEVMEKGTGAMKQPSVLNS
QLQLKPYQLIGLKWLLLLHEHKLSGILADEMGLGKTIQAIAFLSQLYQNGIDGPHLITVP
SSTLDNWIRELKLWCPSLKVLIYYGSVEDRRYLRHDILNEDVEFNVIVTTYNLAIGNDND
RSLFRKLRLKYAVFDEGHMLKNMNTMRYRHLMAINAEHRLLLTGTPLQNNLLELMSLLNF
IMPSMFSSSTTQLSKMFSMKSHEEQSRFERDRISQAKLIMKPFILRRVKSEVLKQLPAKE
EKVEFCSMSEKQQVLYQTLLKKLKTSVNCEKRELCNVMMQLRKMANHPLLHRQYYTTEKL
KAMSKLMLKEPTHFDADAALIQEDMEVMSDFELHRLCQQYSSISSYQLENNLLLDSGKFH
HLTELLASLKNNGDRVVLFSQFTMMLDIVEVLLKHLKHRYVRLDGSTPIADRIVLIDEFN
TDPDIFVFLLSTRAGGLGINLTSANVVVLHDIDCNPYNDKQAEDRCHRVGQTKTVQVIKL
ISKDSIEDCILQLGQKKLKLEQDMTAAEQGGEGTIPEDMASLLKASLGL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttcaatctagaccgttttcgttttgacaagaaggcggcgacgacaacgaca
acaaacaaagacgaggatagtgggtctaaaagtccagagtctgagaaggagaacaagcca
gctcagatgaaagctgtcaaacccccaccaaaatcccacgcccgaggagtggtttttgag
gaagtccttactattgacttggaggaggatgaaacaaagaccaaaatatcattaactagg
aaatccaagaatcccatagggaaatcatctaaaaatctggaatcagatcatacagatgac
gaggacaacgaattggaggagaaaatgaacagactactagagatgtttcctcagttgcca
aggacggagctactggaggtcattgggagcacaagcacattggatggggctgtagctgca
tgccttctaaagtttggtgataaagaagccccagaccaaggcaggaagagaaagcaggat
ggatccagcagttctcaggacagtggtgagattcaacccagcaagaagaggaggcaatca
gtggtttctggtgaagaagataatgaaggcaaagagccaagctgggagaaacaggaagcc
atggtcagaagacttcagaaaaagtttcctgaccaggacaaggaggagctgcggatggtg
ctgcaggaacacgactggaatgttgaggatgctctgcaggttctacaaatgttctcagac
ccagataataccagcttcagctcacctgagacagaagaaaagaagtccagtaaatccaag
agcaaagacaagtcaagcagggaccacagaaagctgaagcgccacaaagatcacggagac
agtaaaaacaggaaagatcgtaaggactccaaataccacagaaatattagtgaaacagag
gaggacagtatagatgatacagacgctacaaaggacagtgaggaggattcagactctgaa
gacagcgacggttccaaaaacaggagtagcacttccattctgtcttcatggcttaaaaaa
agatccgattcagtatcctcatcctcctctgtcaagaaaacaactacctcttcctccctg
aagccatcgtcctcttcctctactgctcagatgctgtccaggtttgccagtgggaccagt
atagctaagaagcaggcagcagagagaaagaggaaggcgcgtgcctcagatgaacatgtc
agttctgagggagaaaataacgatgaagaggacacagttagcagcgagtttgaggactct
gatgaagagctggactctaaaggtggcatgacagatctgaagaaagagatcctcaagttt
ttccaggatgcatctatagatgagctgtcactgatcgctgggtgttcggttaaaaaggcc
cagaagattgtggaactgagaccctttgatagctggcaaagcctggttgacgtcttccat
aaggacaatggactgtcagaggacttactgctgggctgcagagtcgtcctcaaagagcgg
aatgttgtccaggggctcatgtccaaatgtgagaccatttcctcaaaaatggtcaaacaa
gtcactgaggtgatggagaagggcacaggggccatgaaacagcccagcgtactcaacagc
cagttgcagctgaaaccctatcagctgattggtctaaagtggctgctgcttctgcatgag
cacaaactgagtggtatccttgctgatgaaatgggtttggggaaaactatccaggctata
gcgtttctgtcccagctataccagaatggaatagatgggcctcacctcatcactgtgccg
tcctctacactggataactggatcagagagctgaagctgtggtgtccaagcctcaaagtt
ctaatctattatggatctgtggaggaccgccgctacctcaggcacgacatcctcaatgaa
gatgttgagttcaacgtcattgtgaccacgtataacttggccataggaaacgataatgac
cgcagtcttttccgtaagctgcgtctgaagtatgctgtgtttgatgaaggtcacatgctg
aagaatatgaacactatgcgctaccgccaccttatggctattaacgcagagcatcgcttg
ctgctgacaggaactcctttacaaaataacctcttagagctgatgtctctcctgaacttc
attatgccctctatgttctccagctccaccacacagctctccaaaatgttttctatgaaa
tcccatgaggagcagagccgctttgagagggatcgtatttctcaagccaaactcatcatg
aaaccttttatcctccgaagagtcaagagcgaggtcctcaagcagctgccagccaaggag
gagaaagtagagttctgctcaatgagtgagaaacagcaggttctctaccagaccctctta
aaaaaactcaagacttccgtcaattgcgagaagcgcgagttgtgtaatgtgatgatgcag
ttgaggaagatggccaaccaccctctgcttcatagacagtactacaccacagaaaagctc
aaagccatgagcaaactcatgctcaaggagccaactcactttgatgcagacgctgctctg
atccaggaggacatggaagtgatgtcagactttgagctgcatcgtctgtgccagcagtac
tcctccatcagctcctaccagctcgaaaacaatctgctgcttgactctgggaaattccac
cacctcacggagctgctggcctcacttaagaacaacggagaccgagtggtattattcagt
cagttcaccatgatgctggacattgtggaagtgctgctgaaacatcttaagcatcgttac
gtcagactggatggatccacacccatagccgacaggattgtgttgattgatgagttcaac
acggatcctgacatatttgtgttcctgttgtcaacacgtgctggtggcctaggcattaac
ctcacctcagctaatgttgtcgtcctacatgacatcgactgcaatccctacaatgacaag
caggcagaggacagatgtcaccgtgtaggccagaccaagactgtacaggtgattaagctg
atcagtaaggacagcatagaggactgcattctgcagctgggccagaagaaactaaagctg
gagcaggacatgactgctgctgaacagggtggtgaggggaccatacctgaagatatggca
tctttgctgaaagcctcactgggactgtga
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