Siniperca chuatsi (mandarin fish): 122876415
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Entry
122876415 CDS
T08948
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04145
Phagosome
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122876415 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122876415 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122876415 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122876415 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122876415 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122876415 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
schu00536
]
122876415 (thbs4a)
Membrane trafficking [BR:
schu04131
]
Endocytosis
Phagocytosis
Opsonins
122876415 (thbs4a)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122876415 (thbs4a)
Exosomal proteins of colorectal cancer cells
122876415 (thbs4a)
Exosomal proteins of bladder cancer cells
122876415 (thbs4a)
Glycosaminoglycan binding proteins [BR:
schu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122876415 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF_MSP1_1
EGF
Laminin_G_2
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
122876415
NCBI-ProteinID:
XP_044052679
LinkDB
All DBs
Position
LG5:17568513..17579594
Genome browser
AA seq
954 aa
AA seq
DB search
MMGAWARAAALSLLLQQLVLAVTAQGIVYDLLDSPDCLPDLLQGSLKNKGRDEAFLLSSF
RLHNKAPTSLYSVINPKDNTKYLELSVQAKLSKVTLRYQKSDGRFGTTSFNHASLADGQA
HHVMLHASGLQRGPPRLNIYIDCRLAHTLEDLPAAFGSLPPGPNKVALRTLQSSGQDELT
DLKLVIEDTIDNVATLQDCSMDQGESLQLLGIQGGRTVHDQATMLELRSMLSEMKELLNQ
QIKETTLLRNTIAECLACGLGGSPTNTGPAPSPGQFFMQPQPLTQCSPGTCFRQNMCIRT
ESGGFQCTPCPDGYTGDGVHCDDVDECQFSPCFPGVQCVNTAPGFRCGKCPLGYTGPEIN
GVGVSYAKSHKQVCDDIDECLAPPENGGCTANSHCFNTIGSFRCGECKTGFIGDQVRGCH
GTRLCPNGQPNPCDTNAECVVERDGSISCVCGVGWAGNGYVCGKDTDIDAYPDNKLQCRD
NNCKQDNCVFVPNSGQEDADRDGMGDSCDDDADSDGIINIDDNCWLVPNVDQRNSDKDVH
GDACDNCRTVENPTQRDTDQDGLGDECDDDMDGDGLKNILDNCQRVPNPDQKDRDNDGVG
DVCDSCPDMVNPNQSDSDDDLVGDTCDDNIDSDGDGHQNTKDNCPTVINSSQLDTDKDGM
GDECDDDDDNDGILDNDDNCRLVANPDQKDTDKNRVGDACEGDFDKDNVIDVIDHCPENA
EVTLTDFRAYQTVVLDPEGDSQIDPNWMVLNQGMEIVQTMNSDPGLAVGYKAFSGVDFEG
TFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKVVKSKT
GPGEYLRNSLWHTGDTADQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFFEGSE
LVADTGVIIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPSDYQDLNGQNTQ
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgcgtgggccagagcagcggctctgtctctgttgctgcaacagctggtgctc
gctgtcacagctcaaggtattgtctatgacctgctggactctccagactgcctgccagac
ttgctccaaggaagcctgaagaacaaagggcgagatgaggctttcctcctctcttccttc
agactccacaacaaggcccccacctctctctacagtgtcatcaaccccaaagacaacacc
aagtacctggagctcagcgtgcaggccaaactgagcaaggtgacccttcgttaccagaag
agtgacggcagatttggcacaaccagtttcaaccacgcttccctggcagatggccaagct
caccatgtcatgctacatgccagcggcctacagcgcggtccacctcgcctcaacatctat
atagactgcagactggcgcacactttggaagatctgccggctgcgtttgggtcactccca
cctggtcccaacaaggtggcacttaggaccctgcagtcgagtggacaggatgaactgaca
gatttgaagctggtgatagaggacaccatagacaatgtggccactctgcaggactgtagc
atggatcagggtgaatctctgcagctgctgggtatccagggaggcaggacggtacacgac
caggccaccatgctggagctgaggagcatgttatctgagatgaaggagctgctcaaccag
cagattaaggagacaactttactgaggaataccatcgcagagtgtcttgcctgtggtctc
gggggcagtccaaccaacacaggtccagctccaagtcctggccagtttttcatgcagcct
cagcctctgactcagtgctcacccgggacctgtttcagacagaacatgtgtatccgtacg
gagtcagggggtttccagtgtaccccctgtccagatggatatacaggagacggagtgcac
tgtgacgacgtggatgagtgccagtttagcccgtgttttcctggtgtccagtgtgtgaac
actgctcctggttttcgctgtgggaaatgccctctgggatacaccggaccagagataaat
ggagtgggagtgtcctatgctaagtcacacaaacaggtgtgtgacgatatcgatgagtgt
ctggccccgcctgagaatggaggttgcactgccaactcgcactgcttcaacactataggc
tccttccgctgcggagagtgtaaaactggcttcataggtgaccaggtgagaggctgccat
ggtactaggctttgccccaatggtcaacccaacccttgtgacaccaatgctgagtgtgtc
gtggagagagacggcagcattagctgtgtgtgtggcgttggttgggcaggtaatggctac
gtgtgtggaaaggacacagatattgacgcatatcctgacaataagcttcagtgcagggac
aacaactgtaagcaggataactgtgtgtttgtgccaaactctggccaagaggatgcagac
agggatgggatgggtgactcctgtgatgacgatgcagacagtgatggcattattaacata
gatgacaactgctggcttgttcctaatgtggaccaaaggaacagtgataaggacgtccat
ggcgacgcctgtgacaactgcagaacagttgaaaatcccacacagagggataccgatcag
gacgggctgggagatgaatgtgatgatgatatggatggggatggcttgaagaatatcctg
gacaactgccagcgagtccccaacccagaccagaaagacagagacaacgatggggtggga
gatgtctgtgacagctgtcctgatatggtcaaccctaaccagtctgactcagatgatgat
cttgtaggcgatacctgtgacgacaacatagacagtgatggtgacggccaccagaacaca
aaggacaactgtcccacagtcatcaactcctctcagctggacactgacaaggatggaatg
ggagatgaatgtgacgatgacgacgataacgacggaatactggacaatgatgacaactgc
agactagttgccaacccagaccaaaaggacacagacaagaacagagttggagatgcatgc
gaaggagactttgacaaagacaatgtcattgacgtaatcgaccactgcccagagaatgct
gaggtcaccctgactgacttcagagcctatcagactgtagtgctggacccagagggggac
tctcagattgaccccaactggatggtcctcaatcagggcatggagatagttcagaccatg
aactctgaccctggccttgctgtaggctacaaagctttcagtggagttgactttgaggga
acgttccatgtgaacacagtgacagatgatgactatgctggcttcatcttcggctaccag
gactcctcctccttctatgtggtgatgtggaaacagacagagcaaacctactggcaggct
gcgcccttcagagccgttgctgagccgggaatacagctcaaggttgtgaagtcaaagacg
ggtcctggtgagtatctgaggaactccctctggcacacaggagacaccgccgatcaggtc
cgtctcctgtggaaggaccccaggaatgttggctggaaggacaaggtttcctaccgctgg
ttcctccagcacagaccacaggttggatatatcagggcgcgcttttttgagggttcggaa
ctggtggcggacacaggggtgataattgacaccagtatgagaggtgggagactgggcgtg
ttctgcttctctcaggaaaatataatctggtccaatctgaagtaccgttgcaacgacact
attccttctgactaccaggatctcaatggccagaacacacagtga
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