Siniperca chuatsi (mandarin fish): 122876423
Help
Entry
122876423 CDS
T08948
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
schu03420
Nucleotide excision repair
schu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122876423 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
122876423 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122876423 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
schu01001
]
122876423 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122876423 (cdk7)
03019 Messenger RNA biogenesis [BR:
schu03019
]
122876423 (cdk7)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122876423 (cdk7)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
122876423 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
122876423 (cdk7)
Protein kinases [BR:
schu01001
]
Serine/threonine kinases: CMGC group
CDK family
122876423 (cdk7)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122876423 (cdk7)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
122876423 (cdk7)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122876423 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
APH
Motif
Other DBs
NCBI-GeneID:
122876423
NCBI-ProteinID:
XP_044052695
LinkDB
All DBs
Position
LG5:complement(17605376..17611145)
Genome browser
AA seq
343 aa
AA seq
DB search
MALDVKSRSKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGNGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGV
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFNPLTRTTATQALKMRYFSTRPG
PTPGPQLPRPNCSVEALREKETVGLKRKIEGLETTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaaatccagatctaaacgatacgagaaactggatttcctcggagag
ggtcagtttgccacagtatacaaagccagggacaaaacgacggataccatagttgccatt
aaaaagattaaggttggccacagaactgaggctaaagatggtattaataggactgctctt
cgagagatcaaactgctgcaggaactgcatcatccaaatatcattgggctgctggatgcc
ttcggacacaaatctaacatcagcctggtgtttgacttcatggaaacagatctggaggtg
atcatcaaagacaccagtctagtcctgactccagccaacatcaaagcctacatcctcatg
actctacagggactggagtatatgcaccaacactgggttctacacagggatctgaagccc
aataatctgctgttagacggcaacggagtgttgaagttggctgattttggtttggccaaa
tcatttggcagccccaacagagtctacacacatcaagttgttacgaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtacggtgtgggtgttgacatgtgggcagtggga
tgcatcttggcagagttactccttcggataccattcctagctggagactcagatcttgac
cagctgactaagatctttgaggctcttgggacgcccacagaagagacatggcctggagtg
agtagtctaccagactacgtgtccttcaaaatatttcctggcacacctctggaacatata
tttagcgcagctggagacgacttactagagctgctacagggtctcttcacctttaatccc
ttgacaaggaccacagctacacaggctctgaagatgaggtacttcagtactcgacctggt
cccactcctggtccacaactcccccgacccaattgttcagttgaggctctgagggagaag
gaaacagtcgggctcaagaggaaaatcgagggcctggagacaactgtgatgaagaagaag
ctaattttttga
DBGET
integrated database retrieval system
