Siniperca chuatsi (mandarin fish): 122876443
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Entry
122876443 CDS
T08948
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122876443 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
122876443 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122876443 (thoc5)
03041 Spliceosome [BR:
schu03041
]
122876443 (thoc5)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122876443 (thoc5)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122876443 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
122876443
NCBI-ProteinID:
XP_044052735
LinkDB
All DBs
Position
LG5:complement(17853496..17860894)
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AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRNEGGTPEMKRGRGDGDQPDVRVYSEEVELDSRDPEQDYLQYKESC
ESLATLMSEIQDLKANGAKEGCPEVEQRRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQEAPQEISRPQLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLTSLQPGLNAIMQA
SLPVQQYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLIVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLYFYYLMNLNIMTVKTKVSTSIDLNTAISAGDLLKSDTVLCCLYSSDQGRETPNPAN
RYQFDKVGIVCFADYVEELGHPYMWVQSLGGLHFPKDASEGVRVGSSLCASQMESTIKLL
RGRVQSRLALHKQFASLEHSIIPVSTECQHLFPAKIISHLARWTTITHEEYMDLPYTRHV
TDAGLAKETDMYFMGVVERGTARLQAAVVLSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGYQLLTNQISRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacgccctgaagaagcgaaagtcgaaggttctccgcaatgaaggaggaacc
ccagagatgaagcgaggtcgcggagatggggaccagccggatgtgcgtgtgtatagtgag
gaggtggagctggacagcagggaccctgaacaggactacctgcagtacaaagagtcatgt
gagagtttggccacactcatgagtgagatccaggatcttaaagccaacggagccaaagag
gggtgtcctgaggtggagcagagacgtatgcagagctgcatccacttcatgaacctgaaa
aaactcaatcgcctggctcatatgcgactaaagagaggcagagaccagacacacgaggca
aagcagagagtggatgtactgcaccttcagttacagaacctgctgtatgaagttatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaggaaatagatttg
gtgtctgaggaagagttttaccaggaggcgccacaggaaatttccaggcctcaactcaca
aaaaatgatccccaccaactcacactggcacgactggactgggagcttgaacagaggaag
aggttggcagagaaatacaaggagtcacaggccacaaaggagaagatccagaagagcatc
gaggtgaagaaggaacatctgacaagtttgcagccaggactcaatgccatcatgcaggcc
tctctcccagtgcagcagtacctgtccatgccttttgaacagactcagaaacaaacagag
attgcccgccacctgcctccacctctctacgtcctgtttgttcaagccaatgcctatggc
caggcctgtgacaagaacctgattgtctcaatcagtggtgatgtggatgaggccaaggcc
ctgtccaaacctccagaagattcccaggatgatgagagtgattcagatgcagaggaggag
caagagaaaacaaagaggagaaggccaactacaggcggccagctggatgacaaaagacgg
gagatgctgaaaaggcaccctctgtccctctgcttagacctcaagtgtaaagatggcagt
atccttcatctctacttctactacctgatgaatctgaacattatgactgtcaagaccaag
gtctccacctccatagacctcaacacagccatcagcgcaggggatctgctgaaatcagac
actgtactctgctgtctctactctagcgaccagggacgagaaacacccaatccagctaat
cgctaccagtttgataaagtcgggattgtttgctttgctgattatgtggaggagctgggc
catccctacatgtgggttcagagtcttggaggactacattttcccaaagatgcctcagag
ggtgtgcgtgtgggcagttctctgtgtgccagccaaatggagagcaccataaagctgctg
aggggacgagtccagtcccgcctggctttgcacaaacagtttgcctctttagagcacagc
atcatcccggtctccactgagtgtcagcacctctttcctgccaagattatctcccattta
gctcgctggaccactatcactcacgaggagtatatggatctgccatatacacgtcatgtg
actgatgctgggctggcaaaggagactgatatgtactttatgggtgtggtggagaggggc
acagctcgtctccaggccgctgtggtgctgagtccccgttacccagaaatctctcctctt
ttctccctctctctcagctggaagggagagcgcagtggacgcactgatgacaacctacga
gccatggagagtgaggtcaatgtgttcaaaaatgaactacagggcccacgtccaggatac
cagctcctgaccaatcagatttcacgtctgtgcgtctgcctggatgtgtatctggagact
gaaggacaagatgacagcgtggagggaccacgagagtttcccagagagaagatgtgcttg
cgcactgtcaggggcccaaatcgtctgaagccattcaagtacaaccatccccagggcttc
ttcagtcaccgctaa
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