Siniperca chuatsi (mandarin fish): 122876532
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Entry
122876532 CDS
T08948
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03030
DNA replication
schu03410
Base excision repair
schu03420
Nucleotide excision repair
schu03430
Mismatch repair
schu04110
Cell cycle
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122876532 (pcna)
03410 Base excision repair
122876532 (pcna)
03420 Nucleotide excision repair
122876532 (pcna)
03430 Mismatch repair
122876532 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122876532 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
122876532 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122876532 (pcna)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122876532 (pcna)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122876532 (pcna)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122876532 (pcna)
MMR (mismatch excision repair)
Other MMR factors
122876532 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
122876532 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Motif
Other DBs
NCBI-GeneID:
122876532
NCBI-ProteinID:
XP_044052942
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All DBs
Position
LG5:24843264..24847416
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLVLVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSATGELGTGNV
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcctggtccaggggtccatcctgaagaaggtgctggaggctctgaag
gacctgatcacagaagcctgctgggacgtcagctcgtccggcatctccctgcagagcatg
gactcctctcacgtctccctggtccagctcaccctgcggcatgacggcttcgactcgtac
cgctgcgacagaaacctcgccatgggagtcaacctcagcagtatgtcaaaaatcctgaag
tgtgcaggaaacgaagacatcatcaccctcagagcagaagataatgcagacacacttgtc
ctcgtgtttgagacactcaaccaggagaaagtctcagattatgagatgaaactgatggac
ttagatgtggagcagcttggtattccagagcaggagtacagctgtgtggtgaagatgccc
tccggggagtttgcccgtatctgccgtgacctgtcccagatcggtgacgccgtcatgatc
tcctgcgccaaggacggagtcaagttctccgccacgggagagctgggcacaggcaacgtc
aagctgtcccagaccagtaacgtagacaaagaggacgaggcggtcactattgagatgaat
gaacccgtccagctgatctttgccctcaactacctgaacttcttcaccaaggccacgccg
ctgtccaagaccgtcaccctcagcatgtccgctgatatccccctcgtggtggagtacaag
attgctgatatgggacacgtcaaatactacttggcgccgaagatcgatgaagaggcttcc
taa
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