Siniperca chuatsi (mandarin fish): 122876566
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Entry
122876566 CDS
T08948
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122876566 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122876566 (si:dkey-13n15.2)
Membrane trafficking [BR:
schu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122876566 (si:dkey-13n15.2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
122876566
NCBI-ProteinID:
XP_044053001
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All DBs
Position
LG5:complement(29694097..29708780)
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AA seq
1020 aa
AA seq
DB search
MMDVPTANQSQTPCQPWAGQNGWSPASPQEPPCNPLPSFHHLNLGSPSDQIPCYDHLQAS
NQGDLTTFSSYNTHLSTIYANNADQSVQRIFPDAHASSIVPAASHGRNIPPCSLPLLNKG
TQPCKPQQMPIISPHSPYQAICSPFQPPYTHQDSLNGPQSPHQKHLPISSPSFGQCVNQS
PQCTPQPAFERANVESSVGYTHNHAPPSSPIQQQPQWTLSPDSKGTINEFVPNAAVQDRN
ITPQSPNSESRYGLDPELLPSAVKVIAEDRAEWEGKVFVSEPFSRLPPLATTSCIIEDRG
NASPFAIRSASYCVPCEGQTALLSCLPLGALVTPLAKQTAEEKPLPVCKEPECVLGCGWC
GASMCPAMGWQDCGQRFYCPFCGKLSEVPWQHYQPTKGVEGVRVDKDKRPELSMGSYEIL
SSQKGEPAALLLAIDVSASALRGGHLEFATQQILTLLTSLSREDGDAMSDVRVGLMTYDS
RIHLYDLSPALSRPHMLVITETEDLQLPVREGLLVSLKNSIECIDSVLQLIPQFSPECDD
SSGVPMELPVKAGLAVLQALSCPGKLLIFHTAPLIEMGHAKSSSGFFGSNKPKSIFQPSE
LAVSLAKECVSQGCGVHLFVLSQQDVGGAWPGHIPYLTGGALYTYNHLQGELDRERFSTD
LKRIVETDTGYKAELRIFVSKDLRVSGCYGLFIPGPSPGQVPMATLDWFTTLAVELAHTR
ALDETRGVAIQAVLSYSTQTGDRRTRVHTLTLRCSHHLQDTFRQYQAQTLLTFYCKKIYC
AALERPLQELREELQTEATEALASYRKHCCSASVSAGQLVLPQYLRALPVYINSLRKSEV
LLPGLRSSVHQRLQQRCQVLSMDACSTSTHFYPLLLPLPLSVDSSNSPNSEEALRCCAAS
LEPTGLYLVHAPLTLLLWVGTQVPVCTLVKLFNASCFSSLPSGETKLPVLENPLSVSVRS
LINTLNSQTPCARKLWVVKQGDTCEEALQRHLVEDKSPNGGASYADFLYHLHVNSVRLLQ
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtccccacagccaatcagagccagacaccctgtcagccgtgggcgggccag
aacggctggtccccagcttcacctcaagaacccccctgcaaccctctgcccagctttcat
catctcaacctgggctcgccttctgaccagataccctgctatgaccacctgcaggcatcc
aaccagggcgacctcaccaccttttcatcatacaatactcatctcagcacgatatatgct
aataatgctgatcagagtgtgcagcgaatctttcctgatgctcatgcttcatccatagtt
ccagctgcaagccatgggagaaatatacctccatgttctctccctcttctgaacaaaggg
acgcagccttgcaagcctcagcaaatgccaattatctcccctcacagcccttaccaagca
atatgttctcctttccagcctccgtacacacaccaggattcactaaatggacctcagtca
ccacatcaaaaacatctgcccatcagctctccatcatttggacaatgtgtaaaccagagt
ccacagtgtacacctcagcctgcatttgagagggcaaatgtggagtcctctgttggatac
acccacaatcatgccccgccctcctctcctatccaacagcaacctcagtggacactttca
ccagactctaaaggaaccataaacgagtttgttcctaatgcagctgtacaggacaggaac
atcacaccacagtctcctaactctgagtctcgttatggcctggacccagagctcctgccc
agtgctgtgaaggtgattgcagaggacagggcagagtgggagggcaaggtcttcgtctca
gagcctttttcccgtcttcctcctctcgcaactacttcctgtatcatagaggacaggggt
aatgcgagtccttttgccatccgctccgcctcgtactgtgtgccctgtgaaggtcagact
gccctgctcagctgtctgccgctgggagcactggtcacccctctggcaaaacaaactgct
gaagagaagcccctgccagtgtgcaaagagccagagtgtgttttgggttgtggttggtgc
ggagcctccatgtgcccggcgatgggctggcaggactgtggtcagaggttttactgcccc
ttctgtggtaaactcagtgaagtgccgtggcaacactaccagcccacgaaaggggtggag
ggggttcgggtggataaagacaagaggcctgaactcagtatggggtcatatgagatcctc
agttctcagaagggtgaacctgctgcgctgcttctagccatagatgtctctgcctcagca
ctgagaggaggacatttggagtttgcaacgcaacaaatactcactctactcacctctctg
tcgagggaggatggtgatgccatgtctgacgtccgtgttggtttgatgacgtatgacagc
aggatccacctgtacgacctcagccccgccctgtcccgcccacacatgctggtcatcaca
gagacagaagacctgcagcttcctgtgagggaggggcttctggtgtccctgaaaaacagt
atagagtgtatcgacagtgtgttgcagcttattcctcagtttagtccagagtgtgatgac
tctagtggagttcccatggagctgcctgtcaaagcagggctagccgtactgcaggccctg
agttgtcctggcaagctgctgatcttccatactgcccctctgatagagatgggacacgca
aagtcatcctcagggttctttggctccaacaaaccaaagtccatctttcagccgtcagag
ctagccgtctcattggccaaggagtgcgtcagtcagggctgcggtgttcacctgtttgtc
ctctcccagcaagacgtgggtggggcttggccggggcacattccatatctaacaggtgga
gctctgtacacctacaaccacctccagggagaattggacagagagcgtttcagcactgat
ctaaagaggattgtagagacggacacgggctacaaggctgagctcaggatttttgtcagc
aaagatttgcgtgtgtccggctgttatggactttttatccctgggcctagccccggccag
gtccccatggcgactcttgattggtttacaacactggctgtggagcttgcacacaccaga
gctctggatgagacgagaggtgtagccatacaggctgtattgtcttacagcacccagaca
ggagacaggaggaccagggttcacactctgaccctacgatgctcacatcacctacaggac
actttccggcagtatcaggcccaaacactactcaccttctactgcaaaaaaatttactgt
gcggcgttggagcgtcctctacaggagctgagggaggaactgcagacggaggcaacagaa
gcactggcatcctaccgcaaacactgctgctctgcttcagtgtctgctggacagctggtc
ctccctcagtacctgcgagctctccctgtttatatcaacagtctgaggaagagcgaggtg
ctgctgcccggcctgaggagctccgtccaccagcggctgcagcagcgttgccaggtgctc
agcatggacgcctgcagcacctccacacacttctaccctctgctgctgcctttgccgctg
tcagttgacagctccaactctccaaactcagaggaggcactgcgctgctgtgccgccagc
ctagagcccacaggtctgtatttggttcatgcacccctcaccctgctgctctgggtgggc
acccaagtcccagtatgcaccctggtcaagctcttcaacgccagctgcttctcctccctg
ccctctggagagaccaagctgccagttcttgaaaaccctctgtcggtcagcgttcgatcc
ctcatcaacacactgaactcccagacgccctgcgcccgcaagctgtgggtggtgaagcag
ggcgacacctgcgaggaggccctgcagcgccacctggtggaggacaagagtcccaacgga
ggagcgtcctatgcagacttcctctaccatctccacgtcaattctgtccggcttctgcag
tga
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