Siniperca chuatsi (mandarin fish): 122876588
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Entry
122876588 CDS
T08948
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04060
Cytokine-cytokine receptor interaction
schu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122876588 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122876588 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
schu04052
]
122876588 (spaw)
Cytokines and neuropeptides [BR:
schu04052
]
Cytokines
Transforming growth factors (RSTK binding)
122876588 (spaw)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Tox-HNH-HHH
Motif
Other DBs
NCBI-GeneID:
122876588
NCBI-ProteinID:
XP_044053056
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Position
LG5:18974467..18976866
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AA seq
415 aa
AA seq
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MEVLTVFCTFLLCSFGVVFSTQGHRYHTSPEASLAFKNLSVNHRSRYPLYMMQLYRSFRT
ADSSWSVAVNTIQTQGGNPSARSSDSVLSLMARGCDQVGDRWTVTFDMSSISTSELIQLA
ELRIRLPAFSSSKRATVDIYHSRKQSCDTDSTSCQDEHLFLGSFGTSPSSTKSSWKVFNV
TDLLKYWLYQGDGVLSQEASGEPEMDHGSGAGDEEATTAKSLFKNFGLRQRKIHHPTTNR
VMMVIFSKHNLPREGHTAYSLIHTVENSKYVTMDRVSGDSQSRRHKRNRMERMRVADGAS
PTAAPAAEPAQRPLCRKVDMWVDFDHIGWDEWIVHPKRYNAYRCEGECPTPLDESFRPTN
HAYMQSLLRHHHPERGSCPSCVPTRLSPLSMLYYENDDLALRHHEDMIVEECGCH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcctcacagttttctgcacattcctcctctgctcttttggagttgttttctcc
actcaggggcacagatatcacacaagccccgaggccagtttagcattcaaaaatctctca
gtaaatcatcgcagcagataccctctgtacatgatgcagctgtaccgctccttcaggact
gccgattcctcatggtcagtagctgtcaacaccattcagacacaaggtggcaacccgtca
gcgcgcagttctgactccgtcctgagtctgatggccagaggttgtgatcaagttggtgac
cgatggacagtcacgtttgacatgtcatccatctctactagtgaacttatccagctggca
gaacttcggatcagactaccagctttctctagttctaagcgtgccactgtggatatatat
cactccagaaagcagagctgtgatacggacagcacatcgtgccaggatgagcaccttttc
ctggggagcttcggcacatcacccagcagcaccaagtcttcctggaaggttttcaatgtg
actgatttgttaaaatactggctgtatcagggagatggagtgttgagccaagaggcctca
ggagaacctgagatggaccatgggagcggtgctggggatgaagaggcgacaactgccaag
tctctcttcaagaattttggattgaggcaaagaaaaatacaccatccaaccacgaaccgg
gtcatgatggtcatcttctccaaacataatctcccccgggaaggccatacagcatacagt
ctcattcatactgtggagaactccaagtatgtgaccatggacagagtcagcggtgacagt
caaagtcgacgccacaaaaggaacagaatggagaggatgagggtggctgatggagcttca
cctactgctgcaccagcagcagagccggctcagaggccgctgtgtcggaaggtggacatg
tgggtggactttgaccacatcggctgggacgagtggattgtgcaccctaaacgctacaat
gcgtatcgctgtgagggagagtgtcctacaccactggatgagtccttccgtcccaccaac
catgcatacatgcagagcctcttgcgacatcaccatccagaaagagggtcttgcccgtcc
tgcgtgccgacgcgcctcagcccgctctccatgctgtactacgagaacgatgacttggcc
ctgcggcatcatgaggacatgatcgttgaagagtgtggctgtcactga
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