KEGG   Siniperca chuatsi (mandarin fish): 122876602
Entry
122876602         CDS       T08948                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122876602 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:schu03041]
    122876602 (sf3a1)
Spliceosome [BR:schu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122876602 (sf3a1)
 Complex B
    122876602 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    122876602 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 122876602
NCBI-ProteinID: XP_044053086
LinkDB
Position
LG5:12837967..12843411
AA seq 785 aa
MPPGPVQIVQPEPNNKNDAAVEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSSAVPKVMQQAMLQAQQLPQ
KVQSQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKREAENPKEVMDQMRYRVEWA
KFQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPSEQGHFPPPTTPEELGARILI
QERYEKYGESEEVEMEVESEDDDDEREVRNDGQPSQPDQDTQVQDMDEGSDEEDDGMKAP
LPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPSIAAPDEYLISPITGEKIPASKMQEHM
RIGLLDPRWLEQRDRSIRERQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSK
PSEIHHQPPMPSSAAMLPKPSPPVTTMPRLPSSVGPPVRTTLLSAVPVIPRPPVAPVVRL
APGQVLTSMPPMIPAPRINVVPMPPSAPHIMAPRPPPMVVPAAFVPAPPVPQPPSSAPAP
PSHPPPPHEDEPVNKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLN
FTVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMSNGSVIHLALKER
GGRKK
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgccgcctggccctgttcaaattgttcagccggagcccaacaacaagaacgatgcagca
gttgaagaaaccccagccactaaacccatcgtcggtatcatatatccacctcctgaggtc
cgaaacatagttgacaagacagccagctttgttgccaggaatgggcctgagtttgaagca
agaatccgtcagaatgagatcaacaatccaaagtttaatttcctcaaccctaatgacccc
taccatgcctactaccgtcacaaggtcaatgaatttaaggagggcaaagcgcaggaacca
tcttcagcagtgcctaaggttatgcagcaggccatgctgcaggcccaacagcttcctcaa
aaagtgcagtcacaggtgattcaagagacagtggtccccaaagaaccacctcctgagttt
gagttcattgcggatcctccatcaatctcagcatttgatctggatgttgtcaagctcact
gcccagtttgttgctcgcaatggccgccagtttctcactcagctcatgcagaaagaacag
aggaactaccagtttgactttctgcggccacagcacagccttttcaactacttcaccaaa
ctggttgagcagtacactaagattctgatccctcccaaaggcctactgaccaagctgaag
agagaggctgagaatccaaaagaggttatggaccagatgaggtaccgtgttgagtgggca
aagttccaggagcgtgagagaaagaaggaggaggaggaaagagagaaagaacgggtggca
tatgcccaaatcgactggcatgactttgtagtggttgagacagtggatttccagcccagc
gaacaaggccacttccccccacctaccacaccagaggagcttggtgctcgcatcctaatc
caagagcgctacgagaagtatggcgagagtgaggaggtggagatggaggttgagagtgag
gatgacgatgatgaacgggaggttcggaacgatggccagccctcacaacctgaccaagac
acacaagtgcaggacatggatgagggatctgatgaagaggatgatggcatgaaggctcca
ctgccaccagacaaccctatgccacccccactgccaccaactccagaccaggttattatt
cgcaaagactacgatcccaaagcttccaagcctcagccctcaattgcagctccagatgag
tacctcatctcaccaattactggtgagaagattccagccagtaagatgcaagagcacatg
cgtattggtctgctggatccgcgctggctggagcaaagggatcgcagcatcagagagagg
cagaccgaagatgaggtctatgctcctggtttggatatcgagagcagcttgaaacagctg
gctgagaggcgtaccgatatcttcggtgtggaagagacagccatcggtaagaagattggt
gaagaagaaatccagaagccagaggagaaggttacttgggatggccactcaggaagcatg
gctcgtactcagcaggcagcacaggccaatatcaccctgcaagagcagattgaagccatt
cacaaggccaaaggactggtgggagaggacgatactaaggagaaaattggtccaagcaag
cccagtgaaattcatcaccagcctcccatgccctcgtccgcagccatgttgcctaaaccc
agtcctccagtcacaaccatgcctcgcctaccctcctctgttggacctccagtgcgcacc
actctcctgtctgctgtacctgtaataccaagaccgcctgtggctcctgtggtgcgcctt
gcaccaggacaagttttaacatcaatgcctcccatgattcctgctccccgcatcaatgtg
gtccccatgccgccatcagcacctcacattatggcccccagaccacctcccatggttgtt
ccagctgcatttgtccctgctcctccagtaccacaacccccgagctctgctcctgcacca
ccatcccacccacccccacctcatgaggatgagccagtcaacaagaagatgaagacagag
gacaaccttattccagaggaggaattccttcgcagaaataagggtcctgtggcagttaaa
gtacaggtccccaacatgcaggacaagaccgaatggaagctgaatggccaagtgctgaat
ttcactgtcccactcacagatcaggtgtctgttattaaagtcaaaatccatgaagctacc
ggcatgccagcagggaaacagaagttacagtatgagggcattttcattaaagattccaac
tccctggcatattataacatgagcaacggttcagtcatccacttggcactgaaggagaga
ggtggaagaaagaagtga

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