Siniperca chuatsi (mandarin fish): 122876624
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Entry
122876624 CDS
T08948
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122876624 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122876624 (rorb)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122876624 (rorb)
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122876624 (rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122876624
NCBI-ProteinID:
XP_044053130
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Position
LG5:complement(13111496..13135167)
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AA seq
472 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKGGHGNGGGVPGGYYGMDSTQPSPDQSGLD
MSGMKHIKQEPVYDLTPVPNLFSYGGYQDSQLGPNNVSMGELDRIAQNIIKSHLETCQYT
TEELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLI
SRIPTLSALCTLHTEELQTFQQLHPETVNVLFPPLYKELFNPDPNSAMAMPK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccttgcaaaatctgcggagacaaatcatcaggtatc
cactatggagtcattacgtgtgagggatgtaagggtttcttcagacggagtcagcagaac
aatgcatcctactcctgcccccgccagagaaactgcctcatcgacagaacaaaccgtaac
cgctgccaacactgccgcctgcagaaatgtctcgccctaggaatgtccagagatgcggta
aagtttggccgcatgtccaagaagcaacgtgacagcctgtatgcagaggtccagaagcac
caggcgcgactgcaggagcagcggcagcagcagacaggcgaggcggaagctctggcacgt
gtttactcgtccagcctaaccaacggactgtccacccttaaccatgagattgggggcacc
tatgccaacggtcacgtgattgagctgcccaagggtggccatggtaacggaggcggagtc
ccagggggatactatgggatggattccacccagccgtctccagaccagtcaggcttggac
atgtcgggcatgaagcacataaagcaggagccggtgtatgacctgacgccagtgcccaac
ctgttcagctacggaggctaccaggacagtcagctgggacccaataacgtcagcatggga
gagctggaccgtattgctcagaatatcatcaagtcccacttggagacatgtcagtacaca
acagaggagctgcagcagctagcctggcagacacactcttatgaagaggtcaagatgtac
cagagcaagccccgggatgtgctgtggcagcagtgtgccatccagatcacccatgcaatc
cagtatgtggtggagttcgccaagcgcatctcaggattcatggaattgtgccagaacgac
cagatcctcctgctcaagtcgggttgtttggaggtagtcttggtgcggatgtgcagagcg
tttaaccctctcaacaacacggtgctctttgaagggaagtacggcggcatgcagatgttc
aaagctctaggttgtgatgacttagtgagtgcggtgtttgactttgccaagagtttgtgt
tcactgcagctgacagaggaggagatcgctctgttctcagcagctgtactaatttccaca
gatcggccgtggctgatggagcctcggaaagtgcagaagctccaggagaagatctacttt
gctctgcagcacattatgcagaagaaccacatggacgaagacgcattggctaagctgatc
agccgaatcccaacgttgtcagccctgtgcacgctccataccgaggagctccagacgttc
cagcagctccacccagaaacagtcaacgtcctcttccctccgctctacaaagaactcttc
aaccccgaccccaactctgccatggccatgcccaagtga
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