Siniperca chuatsi (mandarin fish): 122876630
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Entry
122876630 CDS
T08948
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122876630 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122876630 (lsm1)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122876630 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
122876630 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122876630
NCBI-ProteinID:
XP_044053137
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Position
LG5:complement(13070557..13073470)
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AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTLLQQVSIEEILEEQRLQQQAKQETEKVKMQVLKDR
GLSVPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccagggacggcaagcctcattgacgacatcgacaagaagcacctggtg
ctgctccgagatggcagaacactgatcggttacctcagaagcattgatcagtttgccaat
ttagtttttcatcagacagttgagcgcatccatgtggggaagaaatttggtgacatcccc
agaggaatattcattgtgagaggagagaatgtggtgctgcttggagagatagatgtggat
aagccctgcgacacactcctgcagcaggtctccattgaagagattctggaggaacagcgg
ttgcagcagcaagccaaacaggagacagagaaagtcaaaatgcaggtcctgaaggaccga
ggcctttccgtccccaaagctgataacttagacgaatactaa
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