Siniperca chuatsi (mandarin fish): 122876637
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Entry
122876637 CDS
T08948
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122876637 (tmc1)
03037 Cilium and associated proteins [BR:
schu03037
]
122876637 (tmc1)
Transporters [BR:
schu02000
]
Other transporters
Pores ion channels [TC:
1
]
122876637 (tmc1)
Cilium and associated proteins [BR:
schu03037
]
Other cilia and associated proteins
Stereociliary proteins
122876637 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
Piezo_TM1-24
UPF0542
Motif
Other DBs
NCBI-GeneID:
122876637
NCBI-ProteinID:
XP_044053150
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All DBs
Position
LG5:complement(13288740..13305133)
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AA seq
967 aa
AA seq
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MPRDSLITSENDIDIGLGFAVDEDDVSTFGEEHERERHRRKRRDGGREKKKRGNRRRKGA
SRAREGEEELQARPEKRERGRRRKKEAEGREGDEEGKAKIKSGKVAKTRKNTKNEKTRTI
EQDEGEAEERNAKGKKKHGSAKKEENKEEGGKHTVKRKVKKKKHKKVVETSSEQETSEAD
DKEVEDKEEKEVRPESLSPEELEKLKEAVDERKKLIQGLRGKPWPMKKKLVTLRESQEFV
EKYEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTTCIPWEMKIKEIESHFGSSVAS
YFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRAEEASAMDFAVLWDFG
GYAQYSVLFYGYYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESGVGD
DNSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVL
ANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCPMLFDVI
STLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIVKFNITTWEASLY
NGTVSENSTAPPNTIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAVLV
RFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMY
LQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGK
KRMFDVIQETLESDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYKEANVEL
KKKLQTQNEENKKKNKRAALKAQMDLEEARKATSSQAAEQQKNNNTSLQDQEADGEENQG
SSQRLYHGKNGRNPPPPVRDQERQLPATRAPVPRTYHHGNHGAHGFLPSFPRQSEPRMHR
VPSLQRH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagacagtctgatcacctctgaaaatgacattgacattggactgggatttgca
gttgacgaggatgatgtttccacttttggagaggaacatgagagggaaagacacagaaga
aaaagaagggatggtggtagagagaagaagaagagggggaataggaggagaaaaggagca
tctagagcaagagaaggggaagaggaattacaagccaggcctgagaaaagagaaaggggc
aggagaagaaagaaagaagcagaaggaagagagggggacgaggaggggaaggccaaaata
aaaagtggtaaggtggcaaaaacgaggaagaataccaaaaatgaaaaaacaagaacaatc
gagcaggacgagggagaagctgaagaaagaaatgccaagggaaaaaagaaacatggaagt
gccaaaaaagaagagaacaaagaggaaggaggtaaacatacagtaaagaggaaagtgaag
aagaaaaagcacaagaaagtagtggaaacaagttcagaacaggagacaagtgaggcagat
gacaaagaagtagaggacaaggaggagaaagaggtgaggccagagtctctgtcaccagag
gagctggaaaagctgaaggaggcagtggatgaaaggaagaaactgatccaaggtctgagg
ggaaaaccctggccaatgaaaaagaaacttgtgactttgcgggagtctcaggagtttgtg
gagaaatatgagggagctttggggaaagggaaaggcaggaaactctatgcatacaaggtc
atgatgaccaagaaatggatgaagtttcagcgggactttgaaaacttcaaaactacctgc
attccatgggagatgaaaatcaaggagattgaaagtcattttggctcctcagttgcctct
tactttatcttcctgaggtggatgtatggcatcaatatgatcttgtttggtctgaccttt
ggcctggttatggtgccagaggcattaatggggcggccctatggcagcatcccaagaaag
actgtccccagggctgaggaggctagtgccatggactttgctgtcttatgggactttgga
ggttacgctcagtattcagtcctcttctacggttactacaacagccagcgtgccattggc
tggctcaagttccgtatgcctttgtcatacttcctggttggtgtgggaacagtggcctat
agctatatggtggtcataagaacgatggcccgtaatgcaaatgagtcgggagttggagat
gataacagctttaatttcagctggaaaatgttcaccagctgggactacctgataggaaac
cctgaaactgcagacaataagtttgcctccatcaccaccagtttcaaggaggcaatctta
gaggagcaagagagccgaaaggatgacaacatccatctgactcgttttctgcgtgtgctg
gccaacttcctggtcttgtgctgcttagcaggaagtggatacctcatctactttgtagtg
cgtcgctctcagaagtttgcccttgatggactggaaaatcacacctggtgggaaaggaat
gaggtgaacatggtcatgtcattactggggatgttctgccccatgttgtttgacgtcatc
agcaccctggagaactaccaccctcgtgtcgccctgcagtggcagctgggtcgcatcttt
gccctcttcttgggaaatctctacaccttcatcattgcactcatggatgagatcaacctc
aaaagggaagaggaaaagatagtaaagtttaatataaccacatgggaagccagtctttac
aatggtacagtatcagaaaacagcactgctccacctaacactatccaccctgctgatgtg
cccagagggccctgctgggagaccatggtggggcaggagtttgtccggctgatcatatct
gataccatgacaacctacatcacgctgctgattggtgatttcctgagagctgtgcttgtt
cgttttctcaactactgctggtgttgggaccttgaggctggatttccgtcctactctgag
tttgatgtcagtgggaatgtcctgggacttatcttcaatcaaggaatgatatggatgggt
gctttctatgccccctgcctgcctgccctaaacgtcctccggctccacgtgtccatgtat
ctgcagtgctgggctgttatgtgctgtaatgtgccgcaggaaagggtcttcaaggcttct
ggctccaacaacttctacatggccatgttgctggtcatcctcttcctgtccactctgcct
gccatctacaccattgtcaccatccccccttcctttgactgcggacccttcagtgggaaa
aaacgtatgtttgatgtgatccaagagacgcttgagtcggactttcctgcctggtttagt
aaagtgttcagctatgcttctaaccctggactggtgctacccttcatattgcttatggta
ctggccatttattacttgcaatccacatccaaaagctacaaagaagctaatgtggaactg
aagaaaaaactacaaacgcaaaatgaggagaacaagaaaaagaacaaacgagcagcgctg
aaggcgcaaatggatctagaggaggccagaaaagctacatcatcacaggctgcagagcaa
caaaagaacaacaacacttcactacaagaccaagaggcagatggggaagaaaaccagggc
agtagtcagcggctgtatcatggtaagaatggacgcaaccctcctcctcctgttagagac
caagagcgccaacttccagccaccagagcccctgtccccaggacctatcaccatggcaac
cacggggctcatgggttcttgcccagtttccctcggcaaagtgaacccaggatgcacagg
gtgccgagcctgcagagacactga
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