KEGG   Siniperca chuatsi (mandarin fish): 122876642
Entry
122876642         CDS       T08948                                 
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122876642 (ciao1)
   03400 DNA repair and recombination proteins [BR:schu03400]
    122876642 (ciao1)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122876642 (ciao1)
DNA repair and recombination proteins [BR:schu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122876642 (ciao1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_Aladin WDR55 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st WD40_Gbeta Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Vps41 Beta-prop_WDR41 NBCH_WD40 eIF2A WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_HPS5 WD40_MABP1-WDR62_1st B-prop_COPA_B_2nd Beta-prop_ELP1_1st Tricorn_2nd Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Lactonase RMC1_N
Other DBs
NCBI-GeneID: 122876642
NCBI-ProteinID: XP_044053158
LinkDB
Position
LG5:complement(13332827..13336559)
AA seq 331 aa
MKEALSLVQRLSAHPDSRCWFVSWSPTGTLLASCGGDKAIRIWGREGDSWICKSVLQDGH
QRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFESLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVTVVNSHTQDVKHVVWHPTQELLASASYDNNICIYKEE
DDDWECRATLQGHTSTVWGLSFDGTGQRLASCSDDRTVKIWKEYPNESGQGDLSWKCVCT
LSGYHGRTVYDVAWCRLTGAMATACGDDAVRVFKEDETADPDQPVFSLAAQVAKAHSQDV
NCVAWNPKEVGLLASCSDDGDIAIWRFQEEH
NT seq 996 nt   +upstreamnt  +downstreamnt
atgaaggaggctttgtccctggttcagagactgagcgcacacccggactcccggtgctgg
ttcgtcagctggagcccgactgggacgctgctggcctcatgcgggggcgacaaggccatc
cggatatggggacgagaaggtgactcttggatatgtaagagtgtgcttcaggatggacac
cagcgcactgtgaggaaagtggcgtggtctccctgtgggaattatctggcctctgccagc
tttgatgcaaccacatgcatctggaaaaagaagaacgatgattttgagagtttgactgtg
ttggaaggacatgaaaacgaggtcaaatgtgtggcgtgggcaccttcagggaatctgctg
gcaacatgtagccgagacaagagtgtctgggtctgggaagtggatgaagaagacgagtat
gagtgtgttaccgtcgtaaactctcacacacaagatgtaaagcatgttgtgtggcacccg
acccaggagctcctggcttcagccagctacgacaacaacatttgtatttacaaggaagag
gatgatgactgggagtgccgggccaccttgcaaggacacacatccacagtctggggtttg
tcttttgatggaactggacagaggctggcctcctgcagcgacgaccgcaccgtgaagatt
tggaaggagtatccaaatgaaagtggacagggagacttgtcatggaaatgtgtttgcact
ctgtctggataccatggacggacagtgtatgatgtcgcctggtgtcggctgactggtgcc
atggcaaccgcctgcggtgacgatgcagtgcgagtgtttaaggaggatgagacagccgat
ccagaccagcccgtgttctcgctggccgcacaggtggccaaagcgcacagccaggatgtc
aactgtgtcgcctggaacccaaaggaggtgggactcctggcctcctgcagcgatgatgga
gatatcgccatctggaggttccaagaggaacactga

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