Siniperca chuatsi (mandarin fish): 122876658
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Entry
122876658 CDS
T08948
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122876658
Cilium and associated proteins [BR:
schu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
122876658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
TPR_14
TPR_19
TPR_9
TPR_6
TPR_NPHP3
PUB
BTAD
ARM_TT21_5th
HlyE
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
122876658
NCBI-ProteinID:
XP_044053187
LinkDB
All DBs
Position
LG5:13521607..13687642
Genome browser
AA seq
2481 aa
AA seq
DB search
MEKQATLKEKFSIFSSRTAGRPIRCVSGDGGARYGLSKAEFMEKVQQSNEACQRGDFQAA
VHLYTNALQADPQNCILYSNRSAALLKLGQHQAALEDAEKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQIKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARDTQDRLLEGDASCGLGAVYQAMGEYETALRCHQSDLESAEEAGSPTRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSEGGSEFQ
EGGNSGVVCGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGSNAKAHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMVAELLG
CQPLAGSAATKERVMSALTQAECAHFATHISWKLAALVLTPNPEGVPGGASASVGVGTVG
RGAGGRRGSSGRGRKGSIGSGYTIPESLHMQDDSSDVESICDSPPLQEFLLTAADILDLR
LPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCALVSLWPVPVAASKVFVHAFYTA
LLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYP
DRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSA
GTGITAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKN
MVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVV
LKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPMGYSTL
PFSPPCLDNQASDAISVYSLSSVASSMSFASKSECDYLGHRQRSGATAHYSVHKHPHVPR
SRSSPHGAAAAVAGARGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVVGG
SSTGAGRGYTVSVSSRGSVSTPTSPVKTCLVPSPNSPFQKVGKVSSSDTGESDQSSTETD
STVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGADGGTAGGTSARSSAFRSSE
TSAFSRPNSSASSRAQSSPRPKPPSRSSSLQKISSGYNSPAVSESSQKEGSHPSPTLDSH
AQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSTSADAPDLD
RLRRGVIDEKVQAIHNLKTFWANAAAAQQQQHLGPVKAVHSASGPLASASRDVLSLLNLS
PRRCSPNDTQDSLELRELGLQSLDRGSKNSSNGHHCSNPRKVAPSPTISTSSSPGARSIR
LPAGNGYKFLSPGRFFPSSKC
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcgactctgaaagaaaagttttcaatcttcagttctcggacagcgggc
agacctatccgctgtgtttctggagacggaggggccaggtatggtctcagcaaagcagag
ttcatggagaaagtgcagcagagcaatgaggcgtgtcagcgtggtgactttcaggcagca
gttcatttgtacactaatgccttgcaagctgacccacagaactgcatcctgtatagtaac
cgttcagcagcgcttctcaaactgggacaacatcaggcggcactggaagacgctgaaaaa
gcttgtgagcttaatcccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcacttgccgccttcgcctctggactggcccaagacccc
aagagcctgcagctactggtgggcatggtagaagccgccatgaaatccccattacgagag
tctctcgagcccacctatcagcagctacaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctgctgacagcaagccaccacacagcctctgttgtg
gtgctggaagccgctttgaagatcggcacatgcagcctcaagctacgcggctccgtcttc
tcggccctcagcagcgcccactggtccctgggcaacaccgagaagagcacaggctacatg
cagcaggacttggaggtggccaagaccttaggtgaccaaacaggggaatgccgggctcat
gggaatctgggatcggcattcttctccaagggaaactaccgcgaagcactgaccaaccat
cgcaaccagctggttctggccatgaagctaaaagacagagaggctgcttcaatggcgctg
agcagcttgggtcatgtatatacagccataggggactatccaaacgccctagccagccac
aagcagtgtgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgcgagctg
ggaaacatgggggccgtctacattgccatgggagactttgacaatgctgtccagtgccat
gagcagcacctgggcattgccaaggccctagaaaataaacgagaggaagctcgggcctat
agtaacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctatcat
actcacgttctggagctcgcccaggagctggaggaaaagtccattgagatgagagcctac
gcaggattgggtcatgctgctcgctgcatgcaggacttggagagggccaagcagtaccat
gaacagcagttgtctatagctgagggtttgaaggacagggccgcagagggaagggcctcc
tccaatctgggcatcatccaccagatgaagggggactatgagactgcactgaaactccac
aaaacacacctggccattgctcaggagttgaatgactatgctgctcagggccgggcctat
ggtaacatgggtaacgcctacaatgccctgggagcctttgaccaggctgttcgctaccac
cgccaggagctgcagatctccatggaggtcaatgaccgggcctcgcaggcctccacccat
ggaaacctggctgtggcttaccaagccctgggagcccatgaccgcgctctgcaacattac
cagaaccacctcaatattgctcgtgagctcagagatgtccagagtgaggcgcgggctctg
ggcaacctcggcaacttccactgctctcgaggagagtttcctcaggccgtgccctactat
gagcagtacctccgcctatcccctgacctccaagacatggagagcgaagggaaagtttgt
cacaatctaggttatgcccactactgtctgggcaactaccaggatgccgtcaaatactat
gagcaggacctagctctggccaaggatcttcatgacaaactgagtcaggccaaggcttac
tgtaacctcggtttggcattcaaagccctgggagacttcactaaggcagaggagtgtcag
aaatacctgctgtcactggcccaatccctgaacaatgcacaggctcgcttcagagctctg
gggaacctcggggacatatttgtctgtaaaaaagatgtggctggagccattcagttttac
gagcagcaactggccttagctcaccagattaaggagcgtaggatggaggcctgtgcctat
gccgccctcggggcaacctacagacttgtgcagaaatatgacaaagctctgggctaccac
acccaggagctggaggtgtatcaagagctgggcgacgtgccaggagagtgcaaagcccat
ggtcacctggcagctgtctacatggccctggggaagtacgccatggccttcaagagctac
gaagagcagttggagctaggtcggaggctgaaggatcctgtcgtggaggctcaggtgtac
ggaaatatgggcatcactaaaatgaatgtaggtgtgatggaggaagctattggctacctg
gagcaacagctagccactttacagcagctgagtggcaacgaggcagtaatggacaggggt
agggcctatggaaacctgggagactgttatgaggctctgggagactttgaggaagccatc
aagtactatgaccagtatctgtcagtggcccagagcctcaaccgcatgcaggaccaggag
aaggcctacagaggcttaggcaatggacacagggctatgggaaacctacagcagtcgctg
gtgtgttttgagaagcggttagtagtggctcatgagctgggggagtgtggagggaaggct
caggcctacggtgaactgggtgcactgcacagtcagctgggcaattacgagcaggctatc
tcttgtctggagcgtcagctggccattgcccgtgacacccaggacagactactggagggt
gatgcaagctgcggtttgggtgctgtatatcaagctatgggagagtatgagacagccctg
cgatgccaccaaagtgacctggagagtgcagaggaagcgggcagccccacacgccaggcc
cgcgcctacgggaacttaggccttacctacgagtcacttggaaactacgagcgggcagtc
gtgttccaggaacagcacctaagtgtggcggctcagactaatgacttggctgccaagaca
ctggcctatggcagcctggggagaacacaccacgcactacaaaactactcacaggctgtc
atgtacctgcaggaaggcctgcggcttgcagagcagctggctcgacgtgaggacgaggcg
aagatccgccatcgtctggggctctctctgtgggccagtgggaatctggaggaggcccaa
catcagctctaccgagcatctgcactgtttgagaccatccgccatgaagcccagcacagc
acagactataaactctccctgtttgacctgcaaacctcttgctaccaggcactccaaagg
gtccttgtcagcctaggccaccatgatgaggctctggcagtggcagagcggggtcgtaca
cgagcctttgctgacctcttggtggagaggcagacagggcagcaggactcagacccctac
accccagtaacagtggagcacatcttggacaccgtcaacagccagagggctttggtgctt
tatttctccatggctgcaggttacctgtacagctggctgctggcaccaggagcaggcatc
ctgaagtttcatgaagtgtacctgggtgagggcgtatcagaaggagggtcagagttccag
gagggaggcaacagtggggtggtctgcggctcctcattggagcagcacattgccagtgcc
cgtgaggctctgggagtagagtcttattacagcagaggatgttcgagcagtgagacagag
agcgaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactca
gtcactgatccaacaggcttcctgcgcatggtgtccagaaacaacctgttcaacaggagt
tgccagagtatgaccagcctgttcagtaacaccatgtcacctgccaaagatggtaactct
tccctgcctcgtcggtccagcaacctcggaaagcctccactccgggcactttatgatttg
ctcattgcacctatggaggggggcttgatgcactccagtggacctgttggcagacacaga
caactggtgatggtgctggagggagaactatacctcatccccttcgccctgctgaaagga
agctcttctaatgaatacctatatgagcgtttcagccttatcgctgttccatccatccat
ggccttggatccaatgcaaaggctcactcccggcgccctggaccagctccatgtggtggt
gtctcaatggcagcagtggtggggaaccctagactgccctcacctgtgatggaccgctgg
ctgtggggacccatgccctctgcagaggaggaggctttaatggtggctgagctgctgggc
tgccaacccctggctggctctgctgccaccaaggaaagggtgatgagtgccctcacacag
gctgagtgtgcccactttgccacccacatttcctggaaactggcagctctggtgctcacc
ccaaaccctgagggtgtgcctggtggggcaagtgccagtgtgggagtgggaacagtgggg
agaggtgcaggggggaggagagggagcagtggtcgaggcaggaagggctccattggaagt
ggctacaccatcccagagtctctccacatgcaggatgacagcagtgacgtggagagcatc
tgtgacagtccgcctctccaggagttcctgctcacagctgcagatatattggacctgagg
ttgcctgtcaagctggtggttctggggtcgtaccaggagtccagcagcaaagtgacagca
gatggtgtcgtgggattgaccagggccttcctggctgctggggctcagtgtgctctcgtg
tctttgtggcctgtccctgtcgcagcctccaaagtttttgtccatgccttctacactgcc
ctgcttaatggaaccaaggctagtgcagcactggcagacgccatgaagactgtccagagc
agcaagcagtactcgcacccctccaactgggcaggatacatgctgattggcaatgatgtc
aaacttaacagcccatcttccctcattggccaagctttggcagagattctacagtatcca
gatcgagcgcgtgatgctctgagagttttactccacctggtggaaaagtctcttcagagg
atacagaatggccagcgtaactccatgtatacttcccagcaaagtgtggagaacaaggtg
gggggtgtccctggttggcaggcgctgttgacagctgtgggcttccgtcttgactctgca
ggcaccggtatcactgctgccgtcttctttccaactgctgatccaggagacaggctccag
cagtgcagcaccactttacaatcactactgggcctgccgccgccagctctccaggctttg
tgcaaactcatcacagcttcagaggcaggagagcagctcatcaaccgggctgttaaaaat
atggtggcaatgctccaccaggtgctagtccaactccagacaggcgagaaagaacaggat
ttctccctcctgcccattcaggtgtccattagtgtgcagctatggaggctgccaggatgc
catgaatttctggctgctcttggatttgacttatgtgaggtcggccaagaagaagtggtg
ctcaagacaggcaagctagccaaccgccgcaccttgcactttgctctccagtctctgctg
gcactgtttgactccacagaactgcccaagcgtctgagcctggacagctcatcttccctt
gagtctctagcttcagcccagtctgtgtccaaccccctgcccatgggatactcaaccctt
cccttctctcccccttgcctggacaatcaggcatcagacgccatctctgtctatagcctc
agctctgtagcctcttccatgagctttgcttccaagtcagagtgtgattatcttggtcat
cggcaacgcagtggggccacagcacactactctgtccacaaacaccctcatgttccccgt
agtcgctcctctcctcatggggcagctgctgcagtggcaggagcccgaggggacgaggag
gaatatgagggcttttccattatcagcagcgagccactgggaagtcactgcgactctctg
cctctgccaccaggccacagccagcgtcaccaccgtggaggcaggggagttgttggtggg
tccagcacaggagcagggagaggttacactgtatcagtatcatcaaggggcagtgtcagc
acccccacatcccctgtcaaaacatgcctggtgcccagcccaaactcaccattccagaag
gtgggtaaggtgagcagctcagatacaggtgaatcggaccagtccagtaccgagacggac
agtactgtcaagtctcaggaagaaaaaactgtccctctggatcctcaggagctggcccag
aagattctggaggagactcagagccatctacgagctgtgggtagtcttcagcgggctggg
gctgacggtggaacagctggaggaacctcagctcggagcagcgccttccgctcttctgag
actagcgcattcagccgtcctaacagcagtgcgagtagccgagctcagtcttccccaaga
cccaaacctccctctcgttcctcttcactgcagaagataagctctggctacaatagtcct
gcagtctctgagtcttcccaaaaggagggcagccatccttcgcccactctggacagccat
gcacagttcaaattaaaatacccaagctccccatacagcggccacatctcccgttctcca
agtaatgtgtctcccagttctggtcatcagtctccggctggtagtgctccatcccctgcc
ctgtcctactcctctacaggctctgcctgctctacatcggctgatgccccagacttggac
cgtctaagaagaggggtcattgatgaaaaagtccaagctatccacaatctgaagaccttt
tgggctaatgctgcagcagcccagcaacagcaacatctaggtcctgtcaaagctgtccac
agcgcttctgggccccttgcttctgctagtagggatgtactaagccttctgaacctctcc
ccacgccgttgctcccctaatgatacccaagacagcctggagctgcgggagctggggctg
cagtcactagataggggcagtaagaactcttccaatggacaccactgctccaaccccaga
aaagtggccccatcacctactatttccacaagcagtagccctggtgctcgttctatccga
ctacctgctggcaatggatacaagttcctgtcgcctggaagatttttcccttcctctaaa
tgctga
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integrated database retrieval system
